Gene omics information

Query gene ID Ta.23819.2.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.23819.2.S1_x_atCK208180--4e-6At5g66750CHR1 (CHROMATIN REMODELING 1)S.X.H.G.
0.6786.3Ta.7240.1.S1_atCK203265--2e-14At5g26680endonuclease, putativeS.X.H.G.
0.6786.3Ta.7322.1.S1_atCK209458--8e-9At1g07970unknown proteinS.X.H.G.
0.5374.9Ta.12200.1.A1_atBJ319450--6e+0At3g1874060S ribosomal protein L30 (RPL30C)S.X.H.G.
0.5072.4Ta.23819.1.A1_atCD889816--6e+0At5g40960unknown proteinS.X.H.G.
0.5072.4Ta.5465.1.A1_atBJ228707--1e+0At3g06600unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.099.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
13.399.5GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat development
10.599.2GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat development
8.698.9GSM298093Crown tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
8.598.9GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.298.8GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat development
8.198.8GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
8.098.8GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.898.7GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.898.7GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.413e-136486Ta.23819.1.A1_atCD889816--6e+0At5g40960unknown proteinC.G.S.X.
0.191e-132474Ta.23715.1.S1_atBJ216647--1e-1At3g16060kinesin motor family proteinC.G.S.X.
0.191e-132474Ta.22567.2.S1_x_atCK214533--8e-12At1g11360universal stress protein (USP) family proteinC.G.S.X.
0.141e-129464TaAffx.143996.1.S1_s_atAJ272181.1--4e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.211e-129464TaAffx.128418.130.A1_atBJ212108--1e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.211e-129464TaAffx.128418.131.A1_x_atBJ246138--1e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.211e-129464TaAffx.128418.131.A1_s_atBJ246138--1e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.211e-129464TaAffx.128418.128.S1_s_atBJ244592--1e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.191e-129464Ta.28968.1.S1_atBE399523--3e-2At1g30960GTP-binding protein (ERG)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-654Arabidopsis thalianaAt5g66750836808CHR1 (CHROMATIN REMODELING 1)Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.---C.G.S.X.
0.187e-101369Glycine maxGmaAffx.89786.1.S1_atCK605840--7e+0At5g09711unknown proteinC.G.S.X.
0.7701515Hordeum vulgareContig8894_atContig8894--3e-6At5g66750CHR1 (CHROMATIN REMODELING 1)C.G.S.X.
0.122e-123444Oryza sativaOsAffx.27508.5.S2_at---0C.G.S.X.
0.196e-98359Populus trichocarpaPtpAffx.249.846.A1_s_atCV266302hypothetical protein-1e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.171e-101369Vitis vinifera1622381_s_atBQ800211--2e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)C.G.S.X.
0.503e-106385Zea maysZm.6916.1.S1_atAW067358hypothetical protein LOC100273981-9e-13At5g66750CHR1 (CHROMATIN REMODELING 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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