Gene omics information

Query gene ID	Ta.23807.9.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.95	99.1	Ta.23807.9.S1_x_at	BJ318634	-	-	2e-87	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	S.X.	H.G.	Please select
0.52	73.7	Ta.2097.2.S1_x_at	CA638237	-	-	3e-12	At3g12390	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	S.X.	H.G.	Please select
0.46	66.8	Ta.6182.1.S1_at	CA604745	eukaryotic translation initiation factor 3 subunit g	-	1e-17	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	S.X.	H.G.	Please select
0.43	62.2	Ta.2097.1.S1_x_at	CA719770	-	-	2e-32	At3g12390	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	S.X.	H.G.	Please select
0.40	58.4	Ta.2097.3.S1_x_at	AL820606	-	-	1e-9	At4g10480	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	S.X.	H.G.	Please select
0.35	49.8	Ta.28268.1.S1_x_at	CA690186	-	-	6e-2	At5g27700	structural constituent of ribosome	S.X.	H.G.	Please select
0.29	39.2	Ta.27401.1.S1_x_at	BJ308508	60s ribosomal protein L21	-	3e-33	At1g09690	60S ribosomal protein L21 (RPL21C)	S.X.	H.G.	Please select
0.23	29.0	Ta.14635.1.S1_a_at	AF479048.1	ribosomal Pr 117	-	9e-81	At2g33370	60S ribosomal protein L23 (RPL23B)	S.X.	H.G.	Please select
0.21	25.5	Ta.23073.1.S1_at	BJ250184	-	-	6e-20	At1g18080	ATARCA	S.X.	H.G.	Please select
0.20	24.0	Ta.24826.3.S1_x_at	BJ263115	-	-	8e-34	At2g34480	60S ribosomal protein L18A (RPL18aB)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.9	94.0	GSM138182	genotype A10 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8	93.6	GSM138159	genotype F36 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8	93.6	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM138157	genotype DH91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM138204	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM111144	genotype AC Domain developing seed at 5 days after anthesis, biological rep1	GSE4929	wheat expression level polymorphism study parental genotypes 2 biological reps
2.5	92.5	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM138179	genotype A88 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.49	0	1326	Ta.23807.7.S1_x_at	BJ297610	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.49	0	1326	Ta.23807.7.S1_at	BJ297610	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.45	0	1227	Ta.23807.4.S1_x_at	BJ311158	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.45	0	1227	Ta.23807.4.S1_s_at	BJ311158	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.37	0	785	Ta.28220.1.S1_at	BJ274890	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.45	0	743	Ta.23807.6.A1_x_at	CK212414	-	-	1e-175	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.45	0	743	Ta.23807.6.A1_at	CK212414	-	-	1e-175	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.33	1e-168	593	Ta.24515.1.S1_at	AF005993.1	HSP70	-	9e-122	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.56	8e-167	587	TaAffx.112076.1.S1_at	CA627274	-	-	1e-90	At3g12580	HSP70 (heat shock protein 70)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	2e-87	323	Arabidopsis thaliana	At5g02500	831020	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	encodes a member of heat shock protein 70 family.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.45	1e-70	268	Glycine max	Gma.11115.1.S1_s_at	AI856377	-	-	7e-68	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.52	0	791	Hordeum vulgare	Contig319_at	Contig319	-	-	2e-48	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.43	1e-126	454	Oryza sativa	Os.38581.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.46	1e-89	331	Populus trichocarpa	Ptp.2604.1.S1_x_at	CV262072	hypothetical protein	-	1e-162	At3g12580	HSP70 (heat shock protein 70)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.46	3e-105	381	Vitis vinifera	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.48	2e-134	478	Zea mays	Zm.12227.1.S1_at	AY104350.1	heat shock cognate 70 kDa protein 2	-	2e-53	At3g09440	heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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