Gene omics information

Query gene ID	Ta.23791.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.78	91.1	Ta.23791.3.S1_x_at	CA705850	-	-	6e-2	At2g25700	ASK3 (ARABIDOPSIS SKP1-LIKE 3)	S.X.	H.G.	Please select
0.57	79.2	TaAffx.17257.1.S1_at	CA613987	-	-	1e-5	At5g13400	proton-dependent oligopeptide transport (POT) family protein	S.X.	H.G.	Please select
0.56	78.6	TaAffx.73975.1.S1_at	BJ231958	-	-	2e+0	At4g35519	unknown protein	S.X.	H.G.	Please select
0.55	76.8	Ta.5516.3.S1_a_at	CA652702	-	-	4e-17	At4g23470	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.53	74.9	Ta.5516.3.S1_x_at	CA652702	-	-	4e-17	At4g23470	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.47	67.9	Ta.5516.2.S1_x_at	CA703744	-	-	3e-13	At4g23470	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.44	64.5	Ta.22895.1.S1_at	BJ319923	-	-	8e-1	At1g60730	aldo/keto reductase family protein	S.X.	H.G.	Please select
0.38	54.7	Ta.3418.2.S1_x_at	BQ804925	-	-	2e+0	At5g26890	unknown protein	S.X.	H.G.	Please select
0.28	39.2	Ta.6161.3.S1_a_at	CA640525	-	-	1e-12	At5g50870	UBC27 (ubiquitin-conjugating enzyme 27)	S.X.	H.G.	Please select
0.23	29.0	Ta.3418.1.S1_x_at	CK214532	glutathione transferase F5	-	6e-1	At5g54430	universal stress protein (USP) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.2	98.5	GSM138147	genotype G13 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.6	98.3	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.5	98.3	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.4	98.2	GSM111227	genotype F48 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.3	98.2	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.4	97.7	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.2	97.5	GSM138168	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.1	97.5	GSM138160	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.9	97.3	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.6	97.0	GSM138216	genotype H9 developing seed at 5 days after anthesis, biological rep2	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	7e-128	456	Ta.23791.1.S1_a_at	CD936252	-	-	2e-9	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	C.G.	S.X.	Please select
0.40	7e-128	456	Ta.23791.1.S1_x_at	CD936252	-	-	2e-9	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	C.G.	S.X.	Please select
0.19	1e-46	186	Ta.22794.1.S1_x_at	BJ235386	hypothetical LOC543011	-	3e-15	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.19	1e-46	186	Ta.22794.1.S1_at	BJ235386	hypothetical LOC543011	-	3e-15	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.19	2e-44	178	Ta.30622.1.S1_x_at	AY316293.1	SKP1/ASK1-like protein	-	2e-16	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.24	5e-33	141	TaAffx.64879.1.A1_at	BJ276474	-	-	5e-19	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.20	5e-27	121	Ta.17701.1.S1_at	CA623590	-	-	3e-2	At2g25700	ASK3 (ARABIDOPSIS SKP1-LIKE 3)	C.G.	S.X.	Please select
0.16	8e-26	117	Ta.25958.1.A1_at	CD454802	-	-	3e-4	At3g21840	ASK7 (ARABIDOPSIS SKP1-LIKE 7)	C.G.	S.X.	Please select
0.18	7e-17	87	TaAffx.129125.1.S1_at	BE413802	-	-	4e-1	At2g25700	ASK3 (ARABIDOPSIS SKP1-LIKE 3)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	6e-2	38	Arabidopsis thaliana	At2g25700	817111	ASK3 (ARABIDOPSIS SKP1-LIKE 3)	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	9e-17	87	Glycine max	Gma.3293.1.S1_at	CD390735	-	-	5e-23	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
0.38	4e-100	363	Hordeum vulgare	Contig12342_at	Contig12342	-	-	7e-6	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select
Os12g0570700	0.20	5e-44	Oryza sativa	Os02g0101600	CB967135	-	SKP1 component family protein	2e-17	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	C.G.	S.X.	Please select
0.06	5e-3	42	Populus trichocarpa	PtpAffx.207591.1.S1_x_at	pmrna15065	hypothetical protein	-	6e-2	At4g13850	GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	3e-7	54	Vitis vinifera	1614112_at	BQ797230	hypothetical protein LOC100252349	-	3e-11	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	C.G.	S.X.	Please select
0.20	2e-30	131	Zea mays	Zm.11647.1.A1_at	CO532634	hypothetical protein LOC100193107	-	3e-14	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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