Gene omics information

Query gene ID	Ta.23663.1.A1_at
Gene name	heat shock protein 16.9
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.23663.1.A1_at	CD915829	heat shock protein 16.9	-	2e-9	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	S.X.	H.G.	Please select
0.06	7.6	TaAffx.30652.1.S1_at	CA623146	-	-	3e-4	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.04	5.8	TaAffx.72723.1.S1_s_at	BE427906	-	-	7e+0	At5g56170	-	S.X.	H.G.	Please select
0.02	3.6	Ta.20317.1.S1_x_at	CA678146	-	-	4e+0	At5g59850	40S ribosomal protein S15A (RPS15aF)	S.X.	H.G.	Please select
0.00	0.7	Ta.6591.3.S1_x_at	CA646755	-	-	1e+0	At1g73910	ATARP4A (Actin-related proteins 4A)	S.X.	H.G.	Please select
0.00	0.7	Ta.6052.2.S1_a_at	CA661259	-	-	3e-8	At3g27740	CARA (CARBAMOYL PHOSPHATE SYNTHETASE A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.1	99.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.6	99.1	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.0	98.5	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.8	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM143513	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.3	97.6	GSM143518	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.1	97.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1519	Ta.23663.1.S1_s_at	CD915829	heat shock protein 16.9 /// heat shock protein 16.9B	-	4e-7	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.71	0	882	Ta.28631.1.S1_at	BQ804592	heat shock protein 16.9	-	4e-4	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.72	0	854	Ta.28630.1.A1_at	CD915560	heat shock protein 16.9	-	3e-8	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	C.G.	S.X.	Please select
0.67	0	854	Ta.28630.1.S1_at	CD915560	heat shock protein 16.9 /// heat shock protein 16.9	-	3e-8	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	C.G.	S.X.	Please select
0.46	0	773	Ta.109.1.S1_at	X64618.1	heat shock protein 16.9B	-	2e-4	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.52	0	751	Ta.24801.1.S1_at	BQ804874	heat shock protein 16.9	-	5e-4	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.55	0	694	Ta.24332.1.S1_at	CD453475	put. heat shock protein (AA 1 -151)	-	6e-3	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.45	4e-180	630	Ta.14573.1.S1_at	BQ246088	heat shock protein 16.9C	-	4e-5	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.53	8e-126	450	Ta.20600.1.S1_at	CA485724	-	-	7e-6	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	2e-9	63	Arabidopsis thaliana	At1g07400	837252	17.8 kDa class I heat shock protein (HSP17.8-CI)	F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.24	7e-22	105	Glycine max	GmaAffx.25859.1.S1_at	AW569963	-	-	8e-1	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	C.G.	S.X.	Please select
0.75	0	692	Hordeum vulgare	Contig2008_s_at	Contig2008	-	-	2e-5	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select
0.53	3e-114	412	Oryza sativa	OsAffx.10905.3.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.10	4e-11	69	Populus trichocarpa	PtpAffx.209307.1.S1_s_at	pmrna18395	hypothetical protein	-	3e-8	At1g07400	17.8 kDa class I heat shock protein (HSP17.8-CI)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	2e-22	105	Vitis vinifera	1612385_at	CB350287	hypothetical protein LOC100244376	-	5e-16	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	C.G.	S.X.	Please select
0.54	5e-94	343	Zea mays	Zm.2482.1.A1_at	BM333007	16.9 kDa class I heat shock protein 1	-	1e-4	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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