Gene omics information

Query gene ID	Ta.23414.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.23414.1.S1_at	CD452900	-	-	3e+0	At5g16990	NADP-dependent oxidoreductase, putative	S.X.	H.G.	Please select
0.73	89.1	Ta.23414.1.S1_x_at	CD452900	-	-	3e+0	At5g16990	NADP-dependent oxidoreductase, putative	S.X.	H.G.	Please select
0.63	83.1	Ta.8790.1.S1_a_at	BJ286046	-	-	7e-6	At4g28840	unknown protein	S.X.	H.G.	Please select
0.57	79.2	Ta.9283.1.S1_at	CD865580	-	-	3e+0	At1g06640	2-oxoglutarate-dependent dioxygenase, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.8814.1.A1_at	BQ162445	-	-	4e+0	At3g56210	binding	S.X.	H.G.	Please select
0.47	67.9	Ta.7319.1.S1_a_at	BQ838118	-	-	4e+0	At2g47810	NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT B5)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
103.4	100.0	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
101.5	100.0	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
82.0	100.0	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
27.8	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
21.5	99.7	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
20.9	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
0.9	73.8	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
0.6	64.8	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
0.6	64.8	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
0.5	61.1	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	2379	Ta.23414.1.S1_x_at	CD452900	-	-	3e+0	At5g16990	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.55	4e-98	359	Ta.14574.2.S1_x_at	BJ296012	-	-	5e-5	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.51	4e-73	276	Ta.14574.2.S1_s_at	BJ296012	-	-	5e-5	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.48	4e-58	226	Ta.14574.1.S1_at	CD921478	-	-	2e-7	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.23	9e-53	208	Ta.16805.1.A1_at	CA613469	-	-	2e+1	At5g57180	CIA2 (CHLOROPLAST IMPORT APPARATUS 2)	C.G.	S.X.	Please select
0.19	3e-31	137	Ta.14574.3.S1_x_at	CA718855	-	-	1e+0	At4g13095	LCR37 (Low-molecular-weight cysteine-rich 37)	C.G.	S.X.	Please select
0.19	3e-31	137	Ta.14574.3.S1_at	CA718855	-	-	1e+0	At4g13095	LCR37 (Low-molecular-weight cysteine-rich 37)	C.G.	S.X.	Please select
0.04	1e-11	71	TaAffx.14288.1.S1_at	CK216092	-	-	1e-5	At1g26320	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.05	8e-10	65	Ta.9135.1.S1_x_at	CK215975	-	-	2e-1	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	34	Arabidopsis thaliana	At5g16990	831562	NADP-dependent oxidoreductase, putative	molecular function has not been defined, was shown involved in oxidative stress tolerance.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+0	36	Glycine max	GmaAffx.47911.1.S1_at	BU545348	-	-	9e-2	At1g55530	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.48	2e-107	389	Hordeum vulgare	Contig5939_at	Contig5939	-	-	1e-5	At3g03080	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.38	6e-43	176	Oryza sativa	Os12g0225900	9640.m01197	-	Allyl alcohol dehydrogenase	5e-1	At3g59845	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-2	42	Populus trichocarpa	PtpAffx.23401.1.S1_at	DN486608	hypothetical protein	-	2e-7	At1g65560	allyl alcohol dehydrogenase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	8e-4	44	Vitis vinifera	1615675_at	CB974778	hypothetical protein LOC100268122	-	4e-32	At5g16980	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.04	2e-8	59	Zea mays	Zm.3560.1.S1_at	AI987350	NADP-dependent oxidoreductase P1	-	3e+0	At2g40170	GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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