Gene omics information

Query gene ID Ta.23397.2.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.4Ta.23397.2.S1_x_atCA718270--1e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.5678.6Ta.23397.2.S1_atCA718270--1e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.1415.8Ta.26286.2.A1_atCD490474--6e+0At4g22620auxin-responsive family proteinS.X.H.G.
0.089.4Ta.30698.1.S1_atCN007990--9e-1At2g32020GCN5-related N-acetyltransferase (GNAT) family proteinS.X.H.G.
0.067.6TaAffx.116536.4.S1_atCA609038--9e-1At1g52880NAM (NO APICAL MERISTEM)S.X.H.G.
0.067.6TaAffx.132012.1.S1_s_atCA592986--6e+0At5g42635glycine-rich proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.599.6GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
12.299.4GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
11.899.3GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
11.799.3GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.399.2GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.198.8GSM111239genotype A91 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
8.098.8GSM111238genotype A91 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.798.4GSM111241genotype F82 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.498.2GSM111225genotype A81 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.298.1GSM138175genotype A81 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.830882Ta.23397.2.S1_atCA718270--1e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
0.756e-130464Ta.23397.1.S1_x_atBJ292777--3e-2At4g33660unknown proteinC.G.S.X.
0.173e-24113Ta.4900.1.S1_atBJ232326--1e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.193e-1893Ta.5103.1.S1_atBJ271759--1e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.102e-1687Ta.28886.1.S1_atCA700076--4e+0At5g55570unknown proteinC.G.S.X.
0.146e-1685Ta.5839.1.S1_x_atBJ291864--9e-2At3g05675protein bindingC.G.S.X.
0.146e-1685Ta.5839.1.S1_atBJ291864--9e-2At3g05675protein bindingC.G.S.X.
0.231e-1481Ta.4871.1.A1_atBE430201--2e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.176e-1375Ta.6187.1.S1_x_atBQ167028--3e-1At5g04030unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-138Arabidopsis thalianaAt2g21660816705CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).---C.G.S.X.
0.021e-242Glycine maxPsAffx.C144000037_atPsAffx.C144000037--2e-3At4g33660unknown proteinC.G.S.X.
0.564e-83307Hordeum vulgareContig1071_s_atContig1071--5e-3At5g19090heavy-metal-associated domain-containing proteinC.G.S.X.
0.084e-654Oryza sativaOs02g0587000AK062460.1-Glycine-rich protein6e+0At1g30515unknown proteinC.G.S.X.
0.072e-138Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.039e-340Vitis vinifera1612137_s_atCF604545hypothetical protein LOC100262769-3e-1At3g25850DC1 domain-containing proteinC.G.S.X.
0.052e-859Zea maysZm.2147.2.A1_atBM341580--1e+0At5g17210unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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