CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.23141.1.S1_at

Gene name puroindoline-a

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.23141.1.S1_at BJ235767 puroindoline-a - 2e+0 At4g29430 rps15ae (ribosomal protein S15A E) S.X. H.G.
0.77 90.8 Ta.19.1.S1_at CD902219 wheat type V thionin - 2e+0 At5g07600 oleosin / glycine-rich protein S.X. H.G.
0.67 86.3 Ta.27778.6.S1_x_at BJ232514 Alpha/beta-gliadin precursor - 4e-2 At1g49010 myb family transcription factor S.X. H.G.
0.67 86.3 Ta.24114.18.S1_x_at BJ239750 - - 1e+0 At5g10520 RBK1 (Rop Binding protein Kinases 1) S.X. H.G.
0.57 79.2 Ta.131.1.S1_at BE430809 low-molecular-weight glutenin storage protein - 7e-1 At3g46613 RTFL4 (ROTUNDIFOLIA LIKE 4) S.X. H.G.
0.56 78.6 Ta.23142.7.S1_x_at BQ244524 - - 9e-3 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
132.9 100.0 GSM314288 tissue type: 22 DAP endosperm - rep2 GSE12508 Transcription patterns during wheat development
118.5 100.0 GSM314287 tissue type: 22 DAP endosperm - rep1 GSE12508 Transcription patterns during wheat development
116.5 100.0 GSM314289 tissue type: 22 DAP endosperm - rep3 GSE12508 Transcription patterns during wheat development
0.0 30.7 GSM315202 target strand labeled: Sense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
0.0 30.7 GSM314286 tissue type: 22 DAP embryo - rep3 GSE12508 Transcription patterns during wheat development
0.0 30.7 GSM314285 tissue type: 22 DAP embryo - rep2 GSE12508 Transcription patterns during wheat development
0.0 30.7 GSM314284 tissue type: 22 DAP embryo - rep1 GSE12508 Transcription patterns during wheat development
0.0 30.7 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
0.0 30.7 GSM138210 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
0.0 30.7 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 3e-76 286 TaAffx.24809.1.S1_x_at CA711878 - - 4e+0 At4g09660 - C.G. S.X.
0.25 4e-26 119 TaAffx.79795.1.S1_at CA708311 - - 4e+0 At4g29170 ATMND1 C.G. S.X.
0.18 5e-13 75 Ta.840.1.S1_at CD888021 15kDa grain softness protein - 1e+0 At3g04990 - C.G. S.X.
0.21 8e-6 52 Ta.69.2.S1_x_at CD888551 15kDa grain softness protein /// 15kDa grain softness protein - 1e+0 At3g61040 CYP76C7 C.G. S.X.
0.07 7e-3 42 Ta.14614.1.S1_at BU607175 Puroindoline-like protein-like - 1e+0 At3g44735 PSK1 C.G. S.X.
0.13 7e-3 42 Ta.115.1.S1_at CD453742 puroindoline-b - 6e+0 At5g64950 mitochondrial transcription termination factor-related / mTERF-related C.G. S.X.
0.03 4e-1 36 TaAffx.84510.1.S1_at CA635342 - - 4e+0 At4g11300 unknown protein C.G. S.X.
0.02 4e-1 36 Ta.25810.1.A1_at CD374040 - - 1e+0 At5g10310 unknown protein C.G. S.X.
0.03 2e+0 34 TaAffx.4471.1.S1_at CA740182 - - 1e+1 At5g25890 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At4g29430 829064 rps15ae (ribosomal protein S15A E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF - - - C.G. S.X.
0.03 6e-1 36 Glycine max PsAffx.psMC006xG09f_s_at PsAffx.psMC006xG09f - - 1e+1 At4g08280 - C.G. S.X.
0.72 0 660 Hordeum vulgare Contig224_s_at Contig224 - - 5e+0 At5g62640 proline-rich family protein C.G. S.X.
0.03 3e+0 34 Oryza sativa Os02g0640100 9630.m04095 - - 6e-1 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.22673.2.A1_at CV263093 - - 1e-4 At2g46510 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) C.G. S.X.
0.02 3e-2 38 Vitis vinifera 1618248_at CF514874 hypothetical protein LOC100250810 - 1e-19 At5g20180 ribosomal protein L36 family protein C.G. S.X.
0.02 1e+1 30 Zea mays Zm.9799.1.A1_at AY111917.1 hypothetical protein LOC100217145 - 1e+0 At4g34870 ROC5 (ROTAMASE CYCLOPHILIN 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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