CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.23107.3.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 67.9 Ta.23107.3.S1_x_at CA655366 - - 1e-28 At3g46060 ATRAB8A S.X. H.G.
0.70 87.2 Ta.3309.1.S1_s_at CA602533 - - 3e-11 At5g47570 unknown protein S.X. H.G.
0.67 86.3 Ta.9617.1.S1_at CD871450 - - 8e-50 At1g16700 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative S.X. H.G.
0.48 69.0 Ta.1077.1.S1_x_at CA700934 - - 2e+0 At1g76200 unknown protein S.X. H.G.
0.46 66.8 Ta.22949.1.S1_a_at CA656313 - - 3e-1 At3g17220 PMEI2 S.X. H.G.
0.42 60.9 Ta.3309.3.S1_x_at BE443725 - - 2e-11 At5g47570 unknown protein S.X. H.G.
0.40 58.4 Ta.9176.1.S1_at BJ218541 - - 7e-47 At1g02130 ARA-5 (ARABIDOPSIS RAS 5) S.X. H.G.
0.36 51.9 Ta.24991.1.S1_x_at CK214927 cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPDH - 4e-120 At3g04120 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) S.X. H.G.
0.35 49.8 Ta.13823.1.S1_a_at CK152063 - - 7e+0 At4g18500 unknown protein S.X. H.G.
0.34 48.1 Ta.2612.2.S1_x_at BU100759 - - 2e-3 At1g72020 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.5 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
2.8 93.6 GSM314278 tissue type: anthers, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
2.7 93.3 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
2.4 92.0 GSM138186 genotype F38b developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.3 91.5 GSM138160 genotype A91 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.3 91.5 GSM138152 genotype G32 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.3 91.5 GSM138164 genotype D15 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2 91.0 GSM138199 genotype C22 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.1 90.3 GSM138184 genotype C25 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.1 90.3 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 9e-171 599 Ta.23107.3.S1_a_at CA655366 - - 1e-28 At3g46060 ATRAB8A C.G. S.X.
0.35 1e-163 575 Ta.23107.1.S1_a_at CK156982 - - 1e-51 At3g53610 ATRAB8 C.G. S.X.
0.26 3e-87 321 Ta.6968.1.S1_at CK196001 - - 1e-45 At3g53610 ATRAB8 C.G. S.X.
0.40 2e-67 256 TaAffx.23406.1.S1_at CA735527 - - 9e-4 At3g53610 ATRAB8 C.G. S.X.
0.34 1e-55 216 Ta.17113.1.S1_at CA617930 - - 3e-48 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.12 2e-24 113 Ta.6968.2.S1_a_at CA604796 - - 2e-33 At5g03520 ATRAB8C C.G. S.X.
0.13 7e-5 48 Ta.17828.1.S1_at CA624647 - - 2e-7 At3g09900 ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E) C.G. S.X.
0.04 1e+0 34 Ta.28188.3.S1_s_at CA604824 - - 1e+0 At1g54270 EIF4A-2 C.G. S.X.
0.02 4e+0 32 TaAffx.121715.1.S1_at CA721313 - - 2e+0 At2g45630 oxidoreductase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 1e-28 127 Arabidopsis thaliana At3g46060 823749 ATRAB8A small GTP-binding protein (ara-3) - - - C.G. S.X.
0.22 2e-27 123 Glycine max GmaAffx.91170.1.S1_x_at CF806895 - - 5e-58 At3g46060 ATRAB8A C.G. S.X.
0.39 7e-139 492 Hordeum vulgare Contig3334_at Contig3334 - - 2e-53 At3g53610 ATRAB8 C.G. S.X.
0.35 2e-37 157 Oryza sativa Os.12233.2.S1_x_at - - - 0 C.G. S.X.
0.20 2e-30 133 Populus trichocarpa PtpAffx.14585.3.S1_at BU893135 hypothetical protein - 2e-133 At3g46060 ATRAB8A C.G. S.X.
0.24 2e-14 77 Vitis vinifera 1622781_a_at CF214778 hypothetical protein LOC100252992 - 1e-46 At3g09900 ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E) C.G. S.X.
0.23 4e-63 240 Zea mays Zm.2826.1.S1_at BM333443 hypothetical protein LOC100192989 - 2e-62 At3g46060 ATRAB8A C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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