Gene omics information

Query gene ID	Ta.23107.3.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	76.8	Ta.23107.3.S1_a_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	S.X.	H.G.	Please select
0.67	86.3	Ta.3263.2.S1_a_at	CA653235	-	-	4e-4	At3g22950	ATARFC1 (ADP-ribosylation factor C1)	S.X.	H.G.	Please select
0.57	79.2	Ta.3263.3.S1_a_at	BJ257707	-	-	5e-4	At1g10630	ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)	S.X.	H.G.	Please select
0.57	79.2	Ta.3263.2.S1_x_at	CA653235	-	-	4e-4	At3g22950	ATARFC1 (ADP-ribosylation factor C1)	S.X.	H.G.	Please select
0.38	54.7	Ta.23107.3.S1_x_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	S.X.	H.G.	Please select
0.33	46.9	Ta.1043.1.S1_at	CK167660	-	-	2e-4	At3g52800	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	94.8	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138152	genotype G32 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM111230	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	9e-171	599	Ta.23107.3.S1_x_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.35	1e-163	575	Ta.23107.1.S1_a_at	CK156982	-	-	1e-51	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.26	3e-87	321	Ta.6968.1.S1_at	CK196001	-	-	1e-45	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.40	2e-67	256	TaAffx.23406.1.S1_at	CA735527	-	-	9e-4	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.34	1e-55	216	Ta.17113.1.S1_at	CA617930	-	-	3e-48	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.12	2e-24	113	Ta.6968.2.S1_a_at	CA604796	-	-	2e-33	At5g03520	ATRAB8C	C.G.	S.X.	Please select
0.13	7e-5	48	Ta.17828.1.S1_at	CA624647	-	-	2e-7	At3g09900	ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)	C.G.	S.X.	Please select
0.04	1e+0	34	Ta.28188.3.S1_s_at	CA604824	-	-	1e+0	At1g54270	EIF4A-2	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.121715.1.S1_at	CA721313	-	-	2e+0	At2g45630	oxidoreductase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	1e-28	127	Arabidopsis thaliana	At3g46060	823749	ATRAB8A	small GTP-binding protein (ara-3)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	2e-27	123	Glycine max	GmaAffx.91170.1.S1_x_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.39	7e-139	492	Hordeum vulgare	Contig3334_at	Contig3334	-	-	2e-53	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.35	2e-37	157	Oryza sativa	Os.12233.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	2e-30	133	Populus trichocarpa	PtpAffx.14585.3.S1_at	BU893135	hypothetical protein	-	2e-133	At3g46060	ATRAB8A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.24	2e-14	77	Vitis vinifera	1622781_a_at	CF214778	hypothetical protein LOC100252992	-	1e-46	At3g09900	ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)	C.G.	S.X.	Please select
0.23	4e-63	240	Zea mays	Zm.2826.1.S1_at	BM333443	hypothetical protein LOC100192989	-	2e-62	At3g46060	ATRAB8A	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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