Gene omics information

Query gene ID Ta.23042.1.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.23042.1.S1_x_atBE517350--1e-2At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.8092.2Ta.3382.1.S1_atAB042627.1--4e+0At3g21460electron carrier/ protein disulfide oxidoreductaseS.X.H.G.
0.8092.2Ta.23822.1.S1_atAF123603.1--6e-2At2g36026-S.X.H.G.
0.7790.8Ta.1362.1.S1_atAB042631.1--1e-2At5g25130CYP71B12S.X.H.G.
0.7389.1Ta.3381.1.S1_atAF123602.1--9e-1At4g31940CYP82C4S.X.H.G.
0.7188.0Ta.23042.2.S1_atCK214164--5e+0At4g2623060S ribosomal protein L31 (RPL31B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.199.9GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat development
55.699.9GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat development
54.799.9GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat development
41.299.9GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat development
35.499.9GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat development
32.699.9GSM314257tissue type: germinating seed, embryo - rep1GSE12508Transcription patterns during wheat development
15.999.6GSM314263tissue type: seedling, crown - rep1GSE12508Transcription patterns during wheat development
15.899.6GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat development
12.199.4GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat development
11.399.3GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat development
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.450712Ta.23042.2.S1_atCK214164--5e+0At4g2623060S ribosomal protein L31 (RPL31B)C.G.S.X.
0.690642Ta.25295.1.S1_atCD373447--7e-4At1g51990O-methyltransferase family 2 proteinC.G.S.X.
0.344e-42173Ta.336.1.S1_x_atAY226581.1caffeic acid O-methyltransferase-1e-8At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.467e-41169Ta.336.2.S1_atBJ252644Flavonoid O-methyltransferase-5e-8At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.242e-38161TaAffx.108314.1.S1_atBE586190--8e-2At2g37950zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.342e-38161Ta.27338.1.S1_atBT009359.1O-methyltransferase 3-7e-1At4g28260unknown proteinC.G.S.X.
0.252e-22107Ta.4350.1.A1_atCA644429Flavonoid O-methyltransferase-2e+1At4g08867unknown proteinC.G.S.X.
0.245e-1789TaAffx.95750.1.S1_atCA648685--7e+0At1g51990O-methyltransferase family 2 proteinC.G.S.X.
0.175e-1169TaAffx.24336.1.S1_atBJ229068--3e+0At3g02910-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-242Arabidopsis thalianaAt5g54160835504ATOMT1 (O-METHYLTRANSFERASE 1)A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase---C.G.S.X.
0.022e-138Glycine maxPsAffx.psHA001iF12r_s_atPsAffx.psHA001iF12r--1e+0At1g19150LHCA6C.G.S.X.
0.684e-139494Hordeum vulgareContig6251_atContig6251--3e+0At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.357e-24113Oryza sativaOs08g0157500AK064768.1-Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)(S-adenosysl-L- methionine:caffeic acid3-O-methyltransferase) (COMT) (CAOMT)2e-7At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.223617.1.S1_atpmrna41687hypothetical protein-3e+1At3g58710WRKY69C.G.S.X.
0.041e-240Vitis vinifera1619450_s_atCF215109hypothetical protein LOC100258977-6e-63At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.219e-23107Zea maysZm.1502.1.A1_atCF637870flavonoid O-methyltransferase-2e+0At3g09032unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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