Gene omics information

Query gene ID	Ta.22913.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.0	Ta.22913.1.S1_at	CA715053	-	-	1e+1	At5g61200	-	S.X.	H.G.	Please select
0.55	76.8	Ta.14547.1.S1_at	BJ317926	-	-	6e-4	At1g26665	-	S.X.	H.G.	Please select
0.55	76.8	Ta.3308.1.S1_at	BJ262335	-	-	8e-31	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	S.X.	H.G.	Please select
0.53	74.9	Ta.829.1.S1_at	BJ283440	-	-	2e-47	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	S.X.	H.G.	Please select
0.50	72.4	Ta.7176.1.S1_at	CD490871	-	-	2e+0	At5g05690	CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)	S.X.	H.G.	Please select
0.23	29.0	Ta.14353.1.S1_at	BU100478	-	-	5e-4	At5g52200	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.4	95.2	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1	94.5	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.6	92.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.6	92.9	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.3	91.5	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.46	3e-47	188	TaAffx.23323.1.S1_at	CA736611	-	-	3e+0	At3g09050	unknown protein	C.G.	S.X.	Please select
0.05	9e-1	34	Ta.16052.1.S1_at	CA596230	-	-	8e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	C.G.	S.X.	Please select
0.03	3e+0	32	TaAffx.64255.1.A1_at	BJ307960	-	-	4e+0	At2g32820	-	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.23352.1.S1_at	CA736191	-	-	3e+0	At5g47290	myb family transcription factor	C.G.	S.X.	Please select
0.02	3e+0	32	TaAffx.130227.1.A1_at	CK167552	-	-	3e+0	At5g63740	zinc finger protein-related	C.G.	S.X.	Please select
0.02	3e+0	32	Ta.6710.1.A1_at	BJ266110	-	-	2e+0	At5g48080	-	C.G.	S.X.	Please select
0.04	3e+0	32	Ta.21196.2.S1_at	CA655989	-	-	8e-1	At3g01260	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	C.G.	S.X.	Please select
0.01	3e+0	32	Ta.12104.1.S1_at	CD939443	-	-	7e-51	At5g53350	CLPX	C.G.	S.X.	Please select
0.03	1e+1	30	TaAffx.93235.1.A1_at	BJ218142	-	-	1e+0	At1g46408	AGL97 (AGAMOUS-LIKE 97)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At5g61200	836241	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.77077.1.S1_at	BG157188	-	-	4e+0	At1g05860	unknown protein	C.G.	S.X.	Please select
0.28	3e-122	436	Hordeum vulgare	Contig13066_at	Contig13066	-	-	3e+0	At1g13930	-	C.G.	S.X.	Please select
0.24	1e-44	180	Oryza sativa	Os06g0334400	AK120969.1	-	Cdk-activating kinase 1At (Cdk-activating kinaseCAK1At)	3e+0	At5g19430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.214920.1.S1_s_at	pmrna28838	cc-nbs-lrr resistance protein /// hypothetical protein /// hypothetical protein	-	2e+0	At5g42530	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	30	Vitis vinifera	1618665_at	CD799476	-	-	7e-1	At5g56070	unknown protein	C.G.	S.X.	Please select
0.23	3e-20	97	Zea mays	Zm.4708.1.A1_at	AI738326	CAK1AT	-	6e-4	At4g28980	cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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