CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.22825.2.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Ta.22825.2.S1_at CA727905 - - 2e+0 At5g35760 beta-galactosidase S.X. H.G.
0.77 90.8 Ta.5994.1.S1_at BJ293603 - - 2e-1 At3g03760 LBD20 (LOB DOMAIN-CONTAINING PROTEIN 20) S.X. H.G.
0.73 89.1 Ta.13803.3.S1_at AL830288 - - 2e+0 At2g29920 unknown protein S.X. H.G.
0.57 79.2 Ta.13803.3.S1_x_at AL830288 - - 2e+0 At2g29920 unknown protein S.X. H.G.
0.55 76.8 Ta.22825.3.S1_x_at CA679205 - - 2e+0 At3g42630 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.40 58.4 Ta.29444.2.S1_s_at CA684925 - - 4e-2 At3g55050 serine/threonine protein phosphatase 2C (PP2C6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 99.1 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.1 99.0 GSM138169 genotype B68 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.9 98.7 GSM138162 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.9 98.7 GSM138200 genotype F48 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.6 98.7 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9 98.0 GSM138149 genotype F29 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.6 97.8 GSM138154 genotype H5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.4 97.7 GSM138188 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3 97.6 GSM138178 genotype A88 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.1 97.5 GSM138199 genotype C22 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 3e-151 535 Ta.22825.1.S1_at AL830010 - - 1e+0 At1g14490 DNA-binding protein-related C.G. S.X.
0.35 3e-151 535 Ta.22825.1.S1_a_at AL830010 - - 1e+0 At1g14490 DNA-binding protein-related C.G. S.X.
0.17 9e-65 248 Ta.22825.3.S1_a_at CA679205 - - 2e+0 At3g42630 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.17 9e-65 248 Ta.22825.3.S1_x_at CA679205 - - 2e+0 At3g42630 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.17 9e-65 248 Ta.22825.3.S1_at CA679205 - - 2e+0 At3g42630 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.03 3e-3 44 TaAffx.59038.1.S1_at CA609371 - - 1e+1 At5g61570 protein kinase family protein C.G. S.X.
0.03 2e-1 38 TaAffx.93485.1.S1_at BJ208688 - - 4e-2 At5g05110 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.02 2e-1 38 TaAffx.8244.1.S1_at CA629944 - - 4e+0 At4g28750 PSAE-1 (PSA E1 KNOCKOUT) C.G. S.X.
0.03 2e-1 38 TaAffx.53435.1.S1_at CA692356 - - 4e+0 At4g13440 calcium-binding EF hand family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At5g35760 833555 beta-galactosidase F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P - - - C.G. S.X.
0.02 3e+0 34 Glycine max PsAffx.C4000116_at PsAffx.C4000116 - - 4e-1 At1g20180 unknown protein C.G. S.X.
0.16 2e-36 153 Hordeum vulgare HB29G06r_at HB29G06r - - 6e-1 At4g37010 caltractin, putative / centrin, putative C.G. S.X.
0.29 1e-68 262 Oryza sativa Os11g0144900 AK120954.1 - - 2e-2 At1g31120 KUP10 C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.147015.1.A1_at CV254698 - - 3e+0 At4g13955 - C.G. S.X.
0.02 1e+1 30 Vitis vinifera 1620023_at CF204115.1 - - 1e+0 At2g29605 unknown protein C.G. S.X.
0.03 6e-2 38 Zea mays Zm.9494.2.A1_a_at CK347526 hypothetical protein LOC100193285 - 2e+1 At5g05380 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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