CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.2278.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.0 Ta.2278.1.S1_x_at CK199734 - - 3e+0 At2g43590 chitinase, putative S.X. H.G.
0.67 86.3 Ta.2278.2.S1_x_at CK196331 - - 5e-2 At3g47540 chitinase, putative S.X. H.G.
0.67 86.3 Ta.2278.2.S1_a_at CK196331 - - 5e-2 At3g47540 chitinase, putative S.X. H.G.
0.67 86.3 Ta.2278.3.S1_x_at CD490414 - - 6e+0 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) S.X. H.G.
0.55 76.8 Ta.2278.2.S1_at CK196331 - - 5e-2 At3g47540 chitinase, putative S.X. H.G.
0.40 58.4 Ta.962.1.A1_at BQ160711 - - 1e+0 At2g05510 glycine-rich protein S.X. H.G.
0.36 51.9 TaAffx.27893.1.S1_x_at CA668653 - - 1e+1 At3g57160 unknown protein S.X. H.G.
0.36 51.9 Ta.21350.1.S1_x_at L11882.1 Wali5 protein - 6e+0 At4g26930 MYB97 (myb domain protein 97) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
44.5 99.9 GSM314258 tissue type: germinating seed, embryo - rep2 GSE12508 Transcription patterns during wheat development
31.8 99.9 GSM314259 tissue type: germinating seed, embryo - rep3 GSE12508 Transcription patterns during wheat development
26.3 99.8 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
25.5 99.8 GSM314257 tissue type: germinating seed, embryo - rep1 GSE12508 Transcription patterns during wheat development
19.5 99.7 GSM143507 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
19.3 99.7 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
17.3 99.6 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
16.9 99.6 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
14.4 99.5 GSM250894 TcLr34_3dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.8 99.3 GSM298081 Leaf tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.70 0 1023 Ta.2278.2.S1_at CK196331 - - 5e-2 At3g47540 chitinase, putative C.G. S.X.
0.70 0 1023 Ta.2278.2.S1_a_at CK196331 - - 5e-2 At3g47540 chitinase, putative C.G. S.X.
0.70 0 1023 Ta.2278.2.S1_x_at CK196331 - - 5e-2 At3g47540 chitinase, putative C.G. S.X.
0.56 1e-178 626 Ta.2278.3.S1_x_at CD490414 - - 6e+0 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) C.G. S.X.
0.46 9e-158 557 Ta.221.1.S1_at AF112963.1 chitinase II precursor - 5e-1 At1g54640 F-box family protein-related C.G. S.X.
0.47 1e-116 420 Ta.224.1.S1_at AF112966.1 chitinase IV precursor - 1e-1 At3g54420 ATEP3 C.G. S.X.
0.26 3e-22 107 TaAffx.1236.1.A1_at CK209022 - - 5e+0 At2g35370 GDCH C.G. S.X.
0.09 2e-10 67 Ta.15405.1.S1_at CA484292 - - 4e+0 At2g17975 zinc finger (Ran-binding) family protein C.G. S.X.
0.03 8e-7 56 Ta.26340.1.A1_at CK198901 - - 4e-1 At4g01700 chitinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e+0 34 Arabidopsis thaliana At2g43590 818961 chitinase, putative F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMV - - - C.G. S.X.
0.02 7e-2 40 Glycine max PsAffx.CL72Contig2_at PsAffx.CL72Contig2 - - 3e-1 At2g25190 unknown protein C.G. S.X.
0.71 0 963 Hordeum vulgare Contig4324_s_at Contig4324 - - 8e+0 At4g26060 unknown protein C.G. S.X.
0.27 3e-48 194 Oryza sativa Os04g0494100 AB096140.1 - Endochitinase A precursor (EC 3.2.1.14) (Seedchitinase A) 1e-1 At2g43590 chitinase, putative C.G. S.X.
0.03 4e+0 34 Populus trichocarpa PtpAffx.2522.3.A1_at CV269821 hypothetical protein - 6e-1 At3g18160 peroxin-3 family protein C.G. S.X.
0.03 8e-1 34 Vitis vinifera 1616064_at CF205270.1 - - 1e-4 At3g47540 chitinase, putative C.G. S.X.
0.27 2e-18 93 Zea mays Zm.1595.1.S1_at CD967190 endochitinase A - 6e-1 At3g54420 ATEP3 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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