Gene omics information

Query gene ID	Ta.22743.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.22743.1.S1_x_at	CA652933	-	-	7e+0	At4g12090	cornichon family protein	S.X.	H.G.	Please select
0.77	90.8	Ta.7022.2.S1_at	BF199967	-	-	5e-1	At1g19320	pathogenesis-related thaumatin family protein	S.X.	H.G.	Please select
0.73	89.1	TaAffx.33753.1.S1_at	CK162146	-	-	7e-1	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	S.X.	H.G.	Please select
0.63	83.1	Ta.7022.1.S1_x_at	BJ281221	-	-	7e-11	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	S.X.	H.G.	Please select
0.57	79.2	TaAffx.84007.1.S1_at	CA646483	-	-	1e+1	Atcg00560	-	S.X.	H.G.	Please select
0.53	74.9	TaAffx.33753.2.S1_s_at	BQ168712	-	-	2e+1	At2g45630	oxidoreductase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.3	99.8	GSM138178	genotype A88 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
16.7	99.6	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
15.8	99.6	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
14.1	99.5	GSM138195	genotype J15 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
13.4	99.5	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.6	99.4	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.3	99.4	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.1	99.4	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.8	99.3	GSM111250	genotype A35 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
10.5	99.2	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	1e-7	56	TaAffx.43678.1.S1_x_at	BF200239	-	-	9e+0	At2g40100	LHCB4.3 (light harvesting complex PSII)	C.G.	S.X.	Please select
0.06	2e-3	42	Ta.8579.1.A1_at	BQ162082	-	-	4e-4	At2g45040	matrix metalloproteinase	C.G.	S.X.	Please select
0.05	2e+0	32	TaAffx.36658.1.S1_at	CA613085	-	-	3e+0	At1g23690	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.106472.1.S1_at	CA718330	-	-	4e+0	At3g32896	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.6187.1.S1_x_at	BQ167028	-	-	3e-1	At5g04030	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.6187.1.S1_at	BQ167028	-	-	3e-1	At5g04030	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.5839.1.S1_x_at	BJ291864	-	-	9e-2	At3g05675	protein binding	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.5839.1.S1_at	BJ291864	-	-	9e-2	At3g05675	protein binding	C.G.	S.X.	Please select
0.04	7e+0	30	TaAffx.8845.1.S1_at	CA619277	-	-	2e+1	At5g16290	acetolactate synthase small subunit, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	7e+0	30	Arabidopsis thaliana	At4g12090	826817	cornichon family protein	F:molecular_function unknown;P:intracellular signaling cascade;C:endomembrane system, membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	9e+0	30	Glycine max	PsAffx.CL715Contig1_at	PsAffx.CL715Contig1	-	-	1e-3	At1g02840	SR1	C.G.	S.X.	Please select
0.05	1e+1	28	Hordeum vulgare	HVSMEh0093D14f_at	HVSMEh0093D14f	-	-	3e+0	At5g53190	nodulin MtN3 family protein	C.G.	S.X.	Please select
0.04	2e-1	36	Oryza sativa	Os08g0377300	9636.m02867	-	Conserved hypothetical protein	3e-1	At1g21864	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	32	Populus trichocarpa	PtpAffx.7770.2.S1_at	DN488472	-	-	6e+0	At4g12090	cornichon family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e-1	34	Vitis vinifera	1611526_at	CF604832	hypothetical protein LOC100251026	-	8e-51	At1g10730	clathrin adaptor complexes medium subunit family protein	C.G.	S.X.	Please select
0.05	1e+1	28	Zea mays	ZmAffx.60.1.S1_at	AI665094	-	-	8e-1	At2g41650	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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