Gene omics information

Query gene ID	Ta.22645.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.22645.1.S1_a_at	CA665091	-	-	6e-14	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	S.X.	H.G.	Please select
0.61	82.0	Ta.970.1.S1_at	BQ236882	-	-	2e-54	At2g42790	CSY3 (citrate synthase 3)	S.X.	H.G.	Please select
0.50	72.4	Ta.970.2.S1_a_at	CA667473	-	-	4e-32	At2g42790	CSY3 (citrate synthase 3)	S.X.	H.G.	Please select
0.33	46.9	Ta.12447.1.A1_at	BQ172356	-	-	1e+0	At1g06420	unknown protein	S.X.	H.G.	Please select
0.15	17.1	Ta.24642.1.S1_x_at	CA664909	-	-	2e-7	At2g43230	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.13	14.6	Ta.9184.1.S1_at	BJ251582	-	-	2e-8	At4g29010	AIM1 (ABNORMAL INFLORESCENCE MERISTEM)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.7	98.7	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8	97.9	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.6	97.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9	97.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	7e-168	591	Ta.22645.2.S1_at	CA719354	-	-	4e-12	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please select
0.02	1e-2	42	Ta.6946.1.A1_at	BJ318755	-	-	3e-11	At1g80070	SUS2 (ABNORMAL SUSPENSOR 2)	C.G.	S.X.	Please select
0.02	5e-2	40	TaAffx.85522.1.S1_at	CA621301	-	-	4e-13	At5g43940	HOT5 (sensitive to hot temperatures 5)	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.57544.1.S1_at	CA627264	-	-	4e+0	At3g21890	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.01	3e+0	34	TaAffx.12963.1.A1_at	BJ215508	-	-	6e+0	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	C.G.	S.X.	Please select
0.01	1e+1	32	TaAffx.98909.1.A1_at	CK211361	-	-	2e+0	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.01	1e+1	32	TaAffx.98909.1.A1_s_at	CK211361	-	-	2e+0	At5g16960	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please select
0.02	1e+1	32	TaAffx.78370.1.S1_at	CA733489	-	-	4e+0	At5g27690	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.01	1e+1	32	TaAffx.30562.1.S1_at	CA624044	-	-	2e-2	At1g53310	ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	6e-14	79	Arabidopsis thaliana	At5g63620	836482	oxidoreductase, zinc-binding dehydrogenase family protein	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	6e-18	93	Glycine max	GmaAffx.87563.1.S1_at	BG881336	-	-	1e-41	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please select
0.77	0	1332	Hordeum vulgare	Contig4476_at	Contig4476	-	-	7e-26	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please select
0.57	3e-171	603	Oryza sativa	Os08g0109200	AK101912.1	-	Zinc-containing alcohol dehydrogenase superfamilyprotein	6e-11	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	5e-9	63	Populus trichocarpa	PtpAffx.158416.1.S1_at	CV131381	hypothetical protein	-	9e-24	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	9e-1	34	Vitis vinifera	1614687_at	CF513596	-	-	4e+0	At5g48070	XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20)	C.G.	S.X.	Please select
0.47	4e-127	454	Zea mays	Zm.14094.1.S1_at	CO519882	S-glutathione dehydrogenase/class III alcohol dehydrogenase	-	3e-3	At5g63620	oxidoreductase, zinc-binding dehydrogenase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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