Gene omics information

Query gene ID	Ta.22415.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.22415.1.S1_x_at	CA743955	-	-	7e+0	At5g24314	PTAC7	S.X.	H.G.	Please select
0.91	98.2	Ta.303.3.S1_at	AJ610447	-	-	2e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	S.X.	H.G.	Please select
0.83	93.4	Ta.303.3.S1_x_at	AJ610447	-	-	2e+0	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	S.X.	H.G.	Please select
0.80	92.2	TaAffx.54157.2.S1_at	CA663807	-	-	6e-3	At1g74550	CYP98A9	S.X.	H.G.	Please select
0.67	86.3	TaAffx.81608.1.S1_at	CA684076	-	-	4e+0	At5g02750	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.303.1.S1_x_at	BG906281	-	-	3e+0	At3g28590	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
47.5	99.9	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
45.2	99.9	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
43.7	99.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
43.5	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
41.1	99.9	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
33.2	99.9	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
29.0	99.8	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.0	99.3	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.7	99.1	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	3e-33	141	TaAffx.54157.2.S1_at	CA663807	-	-	6e-3	At1g74550	CYP98A9	C.G.	S.X.	Please select
0.21	2e-3	42	Ta.18692.1.S1_at	CA640672	-	-	3e+0	At3g32130	-	C.G.	S.X.	Please select
0.08	1e-1	36	TaAffx.54157.1.S1_at	CA744476	-	-	4e+0	At5g41600	BTI3 (VIRB2-INTERACTING PROTEIN 3)	C.G.	S.X.	Please select
0.07	5e-1	34	TaAffx.119714.1.A1_at	BJ261026	-	-	4e-3	At1g74550	CYP98A9	C.G.	S.X.	Please select
0.04	5e-1	34	Ta.10147.3.S1_at	BQ805418	-	-	5e+0	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	C.G.	S.X.	Please select
0.04	5e-1	34	Ta.10147.3.S1_x_at	BQ805418	-	-	5e+0	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	C.G.	S.X.	Please select
0.04	5e-1	34	Ta.10147.2.S1_x_at	BQ608922	-	-	5e+0	At1g23890	NHL repeat-containing protein	C.G.	S.X.	Please select
0.05	2e+0	32	Ta.28737.1.S1_at	CA732307	-	-	3e+0	At1g67856	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.1943.1.S1_at	CK206323	-	-	1e-8	At2g03780	translin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e+0	30	Arabidopsis thaliana	At5g24314	832500	PTAC7	F:molecular_function unknown;P:biological_process unknown;C:plastid chromosome, nucleoid;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-1	34	Glycine max	GmaAffx.85878.1.S1_at	BF067810	-	-	2e-33	At4g23400	PIP1	C.G.	S.X.	Please select
0.09	2e-4	44	Hordeum vulgare	Contig21387_at	Contig21387	-	-	3e-1	At5g41761	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Oryza sativa	Os02g0175600	AK121069.1	-	60S ribosomal protein L27a-3	2e-12	At1g70600	structural constituent of ribosome	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+1	30	Populus trichocarpa	PtpAffx.220167.1.S1_s_at	pmrna36521	hypothetical protein	-	5e-5	At5g45113	mitochondrial transcription termination factor-related / mTERF-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	9e+0	28	Vitis vinifera	1621791_at	CB975255	-	-	7e-1	At1g58110	bZIP family transcription factor	C.G.	S.X.	Please select
0.04	1e+1	28	Zea mays	ZmAffx.558.1.A1_at	AI714528	-	-	3e+0	At5g63740	zinc finger protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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