Gene omics information

Query gene ID	Ta.22076.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	93.4	Ta.22076.1.S1_x_at	BQ161202	-	-	4e-1	At5g48950	thioesterase family protein	S.X.	H.G.	Please select
0.63	83.1	Ta.5579.1.A1_at	BJ286356	-	-	4e+0	At4g20420	tapetum-specific protein-related	S.X.	H.G.	Please select
0.58	79.2	Ta.11699.1.A1_at	BQ170617	-	-	4e+0	At3g20370	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	S.X.	H.G.	Please select
0.58	79.2	Ta.12379.1.A1_at	BJ262004	-	-	2e+0	At5g52450	MATE efflux protein-related	S.X.	H.G.	Please select
0.49	69.7	Ta.4059.1.S1_a_at	BJ263315	-	-	6e-42	At3g09550	protein binding	S.X.	H.G.	Please select
0.45	65.2	Ta.10890.1.S1_at	CK211671	-	-	6e-2	At4g28150	unknown protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.19824.2.S1_s_at	CA679087	-	-	1e-9	At4g27020	unknown protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.19824.1.S1_at	CK214059	-	-	6e-20	At1g70160	unknown protein	S.X.	H.G.	Please select
0.39	56.1	Ta.5500.2.S1_a_at	CA659092	-	-	4e+0	At3g53870	40S ribosomal protein S3 (RPS3B)	S.X.	H.G.	Please select
0.36	51.9	Ta.13260.1.A1_at	BJ239696	-	-	4e-4	At5g62960	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.2	99.4	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.8	99.2	GSM143504	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.9	99.1	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.4	99.1	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.4	98.9	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.1	98.8	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.6	98.7	GSM143503	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.2	98.5	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM143520	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.2	98.1	GSM143518	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	1e-68	260	Ta.11463.3.S1_at	CA654705	-	-	1e-3	At5g48950	thioesterase family protein	C.G.	S.X.	Please select
0.32	2e-58	226	Ta.11463.1.S1_at	BQ170155	-	-	1e-1	At5g48950	thioesterase family protein	C.G.	S.X.	Please select
0.24	4e-41	169	Ta.9694.1.S1_at	CA601538	-	-	1e+0	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	C.G.	S.X.	Please select
0.32	4e-29	129	Ta.22076.2.S1_at	CA719524	-	-	2e-1	At3g42180	catalytic/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.16	2e-15	83	Ta.11463.2.S1_at	BQ166989	-	-	4e+0	At3g43432	unknown protein	C.G.	S.X.	Please select
0.11	7e-6	52	Ta.10740.1.S1_a_at	CK195106	-	-	8e+0	At3g60770	40S ribosomal protein S13 (RPS13A)	C.G.	S.X.	Please select
0.11	7e-6	52	Ta.10740.1.S1_x_at	CK195106	-	-	8e+0	At3g60770	40S ribosomal protein S13 (RPS13A)	C.G.	S.X.	Please select
0.13	7e-6	52	Ta.10740.2.S1_x_at	CA603433	-	-	2e-2	At5g64770	unknown protein	C.G.	S.X.	Please select
0.07	6e-3	42	Ta.7968.1.S1_at	BJ252034	-	-	7e+0	At5g47630	mtACP3 (mitochondrial acyl carrier protein 3)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-1	36	Arabidopsis thaliana	At5g48950	834953	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	GmaAffx.87595.1.S1_at	BI786102	-	-	9e-1	At1g13690	ATE1	C.G.	S.X.	Please select
0.37	4e-64	244	Hordeum vulgare	Contig12737_at	Contig12737	-	-	2e-3	At5g48950	thioesterase family protein	C.G.	S.X.	Please select
0.34	5e-51	202	Oryza sativa	Os03g0691400	AK071319.1	-	Thioesterase superfamily domain containing protein	1e-4	At5g48950	thioesterase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	8e+0	32	Populus trichocarpa	PtpAffx.219529.1.S1_at	pmrna35472	-	-	2e+1	At3g14420	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-3	42	Vitis vinifera	1621137_at	CB975552	hypothetical protein LOC100259669	-	1e-1	At1g48320	thioesterase family protein	C.G.	S.X.	Please select
0.34	4e-76	284	Zea mays	Zm.18012.1.A1_at	CK827313	-	-	2e-3	At5g48950	thioesterase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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