Gene omics information

Query gene ID Ta.2207.2.S1_a_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8393.4Ta.2207.2.S1_a_atCA612248--5e-25At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)S.X.H.G.
0.6786.3Ta.7274.3.S1_a_atAJ612375--1e-3At1g79650RAD23S.X.H.G.
0.6081.0TaAffx.77390.1.S1_atCD893386histone deacetylase-1e-19At5g63110HDA6 (HISTONE DEACETYLASE 6)S.X.H.G.
0.5072.4Ta.7506.2.S1_a_atBJ267303--5e-15At1g27650ATU2AF35AS.X.H.G.
0.4464.5TaAffx.87003.1.S1_s_atCA597427--4e-3At4g19150ankyrin repeat family proteinS.X.H.G.
0.4464.5Ta.30799.3.S1_a_atCA720672--6e-2At5g54580RNA recognition motif (RRM)-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.298.1GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.897.9GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.497.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.397.6GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.097.4GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.596.9GSM298084Crown tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.496.8GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.396.7GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.196.4GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.196.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.450831Ta.2207.1.S1_atCK200975--2e-56At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.521e-121436TaAffx.85687.1.S1_atCA620531--1e-15At3g11270MEE34 (maternal effect embryo arrest 34)C.G.S.X.
0.029e-238Ta.7497.1.S1_atCD453021--2e+0At1g69295PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4)C.G.S.X.
0.029e-238Ta.21166.1.S1_atCD492089--8e-4At4g39540shikimate kinase family proteinC.G.S.X.
0.034e-136TaAffx.7889.1.S1_atCA645332--2e+1At4g18372small nuclear ribonucleoprotein-related / snRNP-relatedC.G.S.X.
0.024e-136Ta.9108.1.S1_atBQ171502--1e-4At2g18400ribosomal protein L6 family proteinC.G.S.X.
0.024e-136Ta.7085.1.S1_atCD894309--8e-7At1g76010nucleic acid bindingC.G.S.X.
0.024e-136Ta.5230.2.S1_atBJ263535--2e+0At4g28870unknown proteinC.G.S.X.
0.024e-136Ta.5091.3.S1_x_atCK197746--1e-30At5g18170GDH1 (GLUTAMATE DEHYDROGENASE 1)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.345e-25115Arabidopsis thalianaAt5g05780830463RPN8A (RP NON-ATPASE SUBUNIT 8A)Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity.---C.G.S.X.
0.372e-31137Glycine maxGmaAffx.65487.1.S1_atAW101035--4e-28At3g11270MEE34 (maternal effect embryo arrest 34)C.G.S.X.
0.490821Hordeum vulgareContig3557_atContig3557--3e-68At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.416e-177621Oryza sativaOs04g0661900AK103551.1--8e-44At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.201e-20101Populus trichocarpaPtp.1315.1.S1_atCV267551hypothetical protein-2e-108At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.221e-1995Vitis vinifera1612915_atCF212348hypothetical protein LOC100247677-8e-115At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.401e-146517Zea maysZm.477.2.A1_atAI737865hypothetical protein LOC100274928-2e-75At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage