Gene omics information

Query gene ID	Ta.214.2.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.214.2.A1_at	BJ231272	-	-	1e-131	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.73	89.1	Ta.28022.2.A1_at	BJ309684	-	-	1e-47	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.67	86.3	Ta.214.2.A1_x_at	BJ231272	-	-	1e-131	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.50	72.4	Ta.2864.1.S1_at	CK208206	-	-	5e-7	At5g36890	BGLU42 (BETA GLUCOSIDASE 42)	S.X.	H.G.	Please select
0.43	62.2	Ta.214.1.S1_x_at	CK210896	beta-tubulin 5	-	2e-168	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.38	54.7	Ta.24372.1.S1_at	CK199727	-	-	4e-1	At3g45980	HTB9	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.9	98.0	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM138137	Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
3.3	95.0	GSM138174	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM138168	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	1925	Ta.214.2.A1_x_at	BJ231272	-	-	1e-131	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.64	0	1570	Ta.214.1.S1_x_at	CK210896	beta-tubulin 5	-	2e-168	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.64	0	1570	Ta.214.1.S1_at	CK210896	beta-tubulin 5	-	2e-168	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.44	0	793	Ta.1544.1.S1_at	BJ264595	beta-tubulin 2	-	0	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.46	0	745	Ta.212.1.S1_at	U76744.1	Beta-tubulin 1	-	6e-147	At5g62700	TUB3	C.G.	S.X.	Please select
0.54	0	694	Ta.28022.2.A1_at	BJ309684	-	-	1e-47	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.46	0	678	Ta.28022.3.S1_x_at	BJ217501	-	-	1e-178	At5g62700	TUB3	C.G.	S.X.	Please select
0.46	0	678	Ta.28022.3.S1_at	BJ217501	-	-	5e-178	At5g62690	TUB2	C.G.	S.X.	Please select
0.43	0	642	Ta.28022.1.S1_x_at	U76895.1	-	-	2e-73	At5g44340	TUB4	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	1e-131	470	Arabidopsis thaliana	At5g12250	831100	TUB6 (BETA-6 TUBULIN)	Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.52	4e-148	525	Glycine max	Gma.2224.1.S1_at	CD406086	-	-	1e-153	At5g62690	TUB2	C.G.	S.X.	Please select
0.65	0	1465	Hordeum vulgare	Contig1512_at	Contig1512	-	-	0	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please select
0.48	0	799	Oryza sativa	Os01g0805900	D30716.1	-	Tubulin beta-2 chain (Beta-2 tubulin)	0	At5g12250	TUB6 (BETA-6 TUBULIN)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.52	1e-110	400	Populus trichocarpa	PtpAffx.891.3.S1_a_at	CF233972	tubulin, beta chain	-	4e-153	At5g62700	TUB3	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.53	1e-125	448	Vitis vinifera	1620596_at	BQ797727	hypothetical protein LOC100259534	-	5e-174	At5g44340	TUB4	C.G.	S.X.	Please select
0.49	0	811	Zea mays	Zm.2458.1.S1_at	CA403461	hypothetical protein LOC100273658	-	3e-108	At5g62700	TUB3	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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