Gene omics information

Query gene ID	Ta.21388.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.21388.1.S1_at	CA675057	-	-	1e+1	At5g64810	WRKY51	S.X.	H.G.	Please select
0.95	99.1	TaAffx.107391.1.S1_at	CA700505	-	-	1e+0	At3g57390	AGL18	S.X.	H.G.	Please select
0.95	99.1	Ta.10688.1.S1_at	AB094060.1	indole synthase	-	3e-3	At4g02610	tryptophan synthase, alpha subunit, putative	S.X.	H.G.	Please select
0.95	99.1	Ta.3380.1.S1_at	AB042629.1	-	-	2e-2	At2g36026	-	S.X.	H.G.	Please select
0.91	98.2	TaAffx.99036.1.A1_at	CK211911	-	-	5e+0	At1g23040	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.91	98.2	Ta.1362.1.S1_at	AB042631.1	-	-	1e-2	At5g25130	CYP71B12	S.X.	H.G.	Please select
0.87	94.2	Ta.3381.1.S1_at	AF123602.1	-	-	9e-1	At4g31940	CYP82C4	S.X.	H.G.	Please select
0.86	94.1	Ta.23822.1.S1_at	AF123603.1	-	-	6e-2	At2g36026	-	S.X.	H.G.	Please select
0.82	92.7	Ta.3382.1.S1_at	AB042627.1	-	-	4e+0	At3g21460	electron carrier/ protein disulfide oxidoreductase	S.X.	H.G.	Please select
0.75	89.8	Ta.23042.1.S1_x_at	BE517350	-	-	1e-2	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
92.3	100.0	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
61.1	99.9	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
59.2	99.9	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
50.6	99.9	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
47.0	99.9	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
44.1	99.9	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
1.9	88.9	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
0.2	46.5	GSM138190	genotype D39 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	1e-40	167	Ta.20228.1.S1_at	CA629459	-	-	6e-2	At4g32340	-	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.79853.1.S1_at	CA733543	-	-	1e+0	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.9197.1.S1_at	CA608418	-	-	7e-2	At3g08740	elongation factor P (EF-P) family protein	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.112557.1.S1_at	CA622991	-	-	4e-1	At2g27270	-	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.27235.1.S1_s_at	BT009580.1	-	-	3e+1	At5g15320	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.27235.1.S1_at	BT009580.1	-	-	3e+1	At5g15320	unknown protein	C.G.	S.X.	Please select
0.04	1e+1	30	TaAffx.129158.2.A1_at	CA736250	-	-	1e+0	At3g49680	BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)	C.G.	S.X.	Please select
0.03	1e+1	30	Ta.9666.3.S1_a_at	CA630209	-	-	3e-1	At1g12665	-	C.G.	S.X.	Please select
0.03	1e+1	30	Ta.9666.3.S1_x_at	CA630209	-	-	3e-1	At1g12665	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At5g64810	836602	WRKY51	member of WRKY Transcription Factor; Group II-c	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.45780.1.S1_at	BI497609	-	-	2e-1	At1g35680	50S ribosomal protein L21, chloroplast / CL21 (RPL21)	C.G.	S.X.	Please select
0.32	1e-29	129	Hordeum vulgare	Contig19106_at	Contig19106	-	-	5e-2	At4g16240	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	32	Oryza sativa	Os.49059.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e-1	36	Populus trichocarpa	PtpAffx.432.2.S1_at	CV250698	-	-	1e+0	At2g27710	60S acidic ribosomal protein P2 (RPP2B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1617205_at	CF512534	hypothetical protein LOC100259996	-	2e-1	At2g37025	TRFL8 (TRF-LIKE 8)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.15196.1.A1_at	BM334170	-	-	2e+1	At5g65158	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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