Gene omics information

Query gene ID	Ta.21349.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.21349.2.S1_x_at	CA613683	-	-	2e+0	At4g30260	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.55	76.8	Ta.3881.1.S1_at	CK160415	-	-	7e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	S.X.	H.G.	Please select
0.53	74.9	Ta.21349.1.S1_x_at	CA673642	-	-	3e+0	At4g30260	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.53	74.9	Ta.3384.2.S1_at	BJ240590	-	-	1e-2	At2g43640	signal recognition particle 14 kDa family protein / SRP14 family protein	S.X.	H.G.	Please select
0.51	73.0	Ta.3765.2.A1_x_at	BQ241030	-	-	5e+0	At1g01910	anion-transporting ATPase, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.8663.2.A1_at	BQ170671	-	-	3e-1	At2g16720	MYB7 (MYB DOMAIN PROTEIN 7)	S.X.	H.G.	Please select
0.48	69.0	Ta.8663.2.A1_x_at	BQ170671	-	-	3e-1	At2g16720	MYB7 (MYB DOMAIN PROTEIN 7)	S.X.	H.G.	Please select
0.46	66.8	Ta.21349.1.S1_a_at	CA673642	-	-	3e+0	At4g30260	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.37	53.0	Ta.1305.1.S1_x_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	S.X.	H.G.	Please select
0.33	46.9	Ta.1305.1.S1_a_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.7	97.9	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM111215	genotype C58 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.95	4e-137	486	Ta.21349.2.S1_at	CA613683	-	-	2e+0	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.52	3e-33	141	Ta.21349.1.S1_a_at	CA673642	-	-	3e+0	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.52	3e-33	141	Ta.21349.1.S1_x_at	CA673642	-	-	3e+0	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.03	1e-1	36	TaAffx.131459.1.S1_at	CA701264	-	-	2e+0	At4g20020	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Ta.18772.1.S1_at	CA641994	-	-	6e-13	At3g06790	plastid developmental protein DAG, putative	C.G.	S.X.	Please select
0.03	2e+0	32	TaAffx.128643.3.S1_at	BQ806835	-	-	2e+0	At5g21950	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.03	2e+0	32	TaAffx.128643.2.A1_at	CK215695	-	-	1e-2	At5g27690	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.112577.1.S1_at	CA622761	-	-	3e-1	At1g74490	protein kinase, putative	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.28689.1.S1_at	CA670656	-	-	4e+0	At3g11200	AL2 (ALFIN-LIKE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	32	Arabidopsis thaliana	At4g30260	829149	integral membrane Yip1 family protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFPOBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e-1	36	Glycine max	GmaAffx.76123.1.S1_at	BF597844	-	-	5e-2	At1g31040	unknown protein	C.G.	S.X.	Please select
0.04	1e+1	28	Hordeum vulgare	HA02d18r_at	HA02d18r	-	-	1e+0	At5g13250	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	34	Oryza sativa	OsAffx.15352.3.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	3e+0	32	Populus trichocarpa	PtpAffx.206171.1.S1_at	pmrna12250	hypothetical protein	-	6e-1	At5g41810	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+0	30	Vitis vinifera	1611617_at	CF373170	hypothetical protein LOC100261039	-	3e-1	At4g12150	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.09	1e-5	48	Zea mays	Zm.12085.1.S1_at	BM380973	mitochondrial import receptor subunit TOM7-1	-	8e-8	At5g41685	mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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