CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.21345.1.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.81 92.4 Ta.21345.1.A1_x_at CA718360 - - 2e+1 At5g26330 plastocyanin-like domain-containing protein / mavicyanin, putative S.X. H.G.
0.94 98.9 Ta.245.1.S1_at AF207546.1 cold-responsive protein COR14b - 1e+0 At2g43120 pirin, putative S.X. H.G.
0.92 98.5 Ta.13650.1.A1_at CK211830 - - 9e-2 At5g49120 senescence-associated protein-related S.X. H.G.
0.88 94.4 Ta.1165.1.A1_at AF207545.1 WCOR14a - 2e+0 At3g06590 transcription factor S.X. H.G.
0.82 92.7 TaAffx.97767.1.A1_at CA721990 - - 4e+0 At3g19508 unknown protein S.X. H.G.
0.82 92.7 Ta.3189.1.S1_x_at CK152358 - - 7e+0 At2g20740 - S.X. H.G.
0.80 92.2 Ta.1138.1.S1_at AF255053.1 Cold-responsive LEA/RAB-related COR protein - 7e+0 At2g35470 unknown protein S.X. H.G.
0.80 92.2 Ta.28273.1.S1_x_at BQ483998 - - 4e+0 At3g24070 zinc knuckle (CCHC-type) family protein S.X. H.G.
0.79 91.3 Ta.8097.1.A1_at BG908758 - - 4e+0 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative S.X. H.G.
0.75 89.8 Ta.20697.1.S1_at CA676790 - - 1e+0 At1g45230 defective chloroplasts and leaves protein-related / DCL protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.3 99.9 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
41.6 99.9 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
24.1 99.8 GSM298077 Leaf tissue of Solstice at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
23.7 99.8 GSM298079 Leaf tissue of Solstice at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
22.9 99.8 GSM298082 Leaf tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
20.6 99.7 GSM298080 Leaf tissue of Solstice at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
19.4 99.7 GSM298081 Leaf tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
18.9 99.7 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
18.1 99.7 GSM298078 Leaf tissue of Solstice at 3 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
16.4 99.6 GSM298057 Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.87 0 676 Ta.21345.1.A1_at CA718360 - - 2e+1 At5g26330 plastocyanin-like domain-containing protein / mavicyanin, putative C.G. S.X.
0.14 3e-60 232 TaAffx.110124.1.S1_x_at CA664426 - - 3e+0 At2g14247 Expressed protein C.G. S.X.
0.14 3e-60 232 TaAffx.110124.1.S1_at CA664426 - - 3e+0 At2g14247 Expressed protein C.G. S.X.
0.44 2e-46 186 TaAffx.110147.1.S1_at BG905569 - - 1e+1 At4g37409 unknown protein C.G. S.X.
0.06 4e-10 65 TaAffx.82753.2.S1_at CA667656 - - 6e-1 At3g07590 small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative C.G. S.X.
0.05 4e-10 65 TaAffx.82455.1.S1_at CA673911 - - 4e+0 At4g15930 microtubule motor C.G. S.X.
0.06 4e-10 65 TaAffx.7150.1.S1_at CA667568 - - 4e+0 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) C.G. S.X.
0.06 4e-10 65 TaAffx.7150.1.S1_x_at CA667568 - - 4e+0 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) C.G. S.X.
0.06 4e-10 65 TaAffx.7136.1.S1_at CA667860 - - 1e+0 At2g34200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+1 30 Arabidopsis thaliana At5g26330 832702 plastocyanin-like domain-containing protein / mavicyanin, putative F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF - - - C.G. S.X.
0.03 2e+0 34 Glycine max HgAffx.22836.1.S1_at BG310714 - - 9e-1 At2g25070 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.37 9e-53 206 Hordeum vulgare Contig12563_s_at Contig12563 - - 1e+0 At3g25716 unknown protein C.G. S.X.
0.05 8e-7 56 Oryza sativa Os07g0501100 AK110924.1 - Chalcone synthase (EC 2.3.1.74)(Naregenin-chalcone synthase) 2e-1 At2g14247 Expressed protein C.G. S.X.
0.03 3e+1 30 Populus trichocarpa PtpAffx.222838.1.S1_at pmrna40513 hypothetical protein - 4e+1 At5g53420 - C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1622456_at CF609276 hypothetical protein LOC100245907 /// hypothetical protein LOC100265993 - 2e-1 At5g65870 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) C.G. S.X.
0.03 2e-1 36 Zea mays Zm.17255.1.A1_at CK144641 - - 6e+0 At2g46930 pectinacetylesterase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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