Gene omics information

Query gene ID	Ta.21119.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	66.8	Ta.21119.1.S1_a_at	CD915118	-	-	3e-3	At3g63000	NPL41 (NPL4-LIKE PROTEIN 1)	S.X.	H.G.	Please select
0.91	98.2	Ta.608.1.S1_x_at	BJ319046	-	-	2e-8	At5g09920	NRPB4	S.X.	H.G.	Please select
0.77	90.8	Ta.608.1.S1_at	BJ319046	-	-	2e-8	At5g09920	NRPB4	S.X.	H.G.	Please select
0.67	86.3	Ta.30622.1.S1_x_at	AY316293.1	SKP1/ASK1-like protein	-	2e-16	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	S.X.	H.G.	Please select
0.50	72.4	Ta.1096.2.S1_x_at	CA601240	-	-	2e-2	At1g27350	-	S.X.	H.G.	Please select
0.26	33.6	Ta.562.3.A1_x_at	AJ609777	-	-	1e-1	At5g05987	PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.9	96.1	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7	95.8	GSM138147	genotype G13 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138177	genotype A40 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138164	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM138208	genotype H23 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0	94.3	GSM111194	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.0	94.3	GSM138190	genotype D39 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0	94.3	GSM111226	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.85	0	2038	Ta.21119.1.S1_at	CD915118	-	-	3e-3	At3g63000	NPL41 (NPL4-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.49	0	678	Ta.21119.3.S1_at	CA613082	-	-	1e-3	At3g63000	NPL41 (NPL4-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.49	0	678	Ta.21119.3.S1_x_at	CA613082	-	-	1e-3	At3g63000	NPL41 (NPL4-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.38	1e-156	553	Ta.21119.2.S1_at	CA647503	-	-	4e-3	At2g47970	NPL4 family protein	C.G.	S.X.	Please select
0.38	1e-156	553	Ta.21119.2.S1_a_at	CA647503	-	-	4e-3	At2g47970	NPL4 family protein	C.G.	S.X.	Please select
0.17	6e-29	129	TaAffx.110986.1.S1_at	CA650260	-	-	1e+1	At4g29080	PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)	C.G.	S.X.	Please select
0.01	4e-2	40	Ta.7187.2.S1_at	CD873321	-	-	4e-27	At4g27880	seven in absentia (SINA) family protein	C.G.	S.X.	Please select
0.01	4e-2	40	Ta.7187.2.S1_s_at	CD873321	-	-	4e-27	At4g27880	seven in absentia (SINA) family protein	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.90054.1.S1_at	BQ609022	-	-	1e+0	At1g51030	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-3	44	Arabidopsis thaliana	At3g63000	825475	NPL41 (NPL4-LIKE PROTEIN 1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	6e-8	59	Glycine max	GmaAffx.39212.2.S1_at	BG363009	-	-	7e-21	At2g47970	NPL4 family protein	C.G.	S.X.	Please select
0.32	1e-71	270	Hordeum vulgare	HW04A09u_s_at	HW04A09u	-	-	5e-1	At1g16090	WAKL7 (wall associated kinase-like 7)	C.G.	S.X.	Please select
0.42	5e-148	525	Oryza sativa	Os01g0377700	AK107503.1	-	NPL4 domain containing protein	3e-1	At3g63000	NPL41 (NPL4-LIKE PROTEIN 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	1e-3	46	Populus trichocarpa	Ptp.188.1.A1_at	CF118869	hypothetical protein	-	6e-34	At2g47970	NPL4 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	7e-1	34	Vitis vinifera	1614859_at	CB978757	-	-	1e+0	At5g25640	-	C.G.	S.X.	Please select
0.40	6e-132	470	Zea mays	Zm.9169.2.S1_a_at	CO521754	hypothetical protein LOC100194136	-	9e-10	At2g47970	NPL4 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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