Gene omics information

Query gene ID	Ta.21086.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.82	92.7	Ta.21086.2.S1_x_at	BJ307886	-	-	3e-16	At2g20930	-	S.X.	H.G.	Please select
0.53	74.9	Ta.1053.2.S1_x_at	CA686041	-	-	1e-4	At1g65930	isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative	S.X.	H.G.	Please select
0.53	74.9	Ta.3887.3.A1_s_at	BJ248686	-	-	2e-2	At1g53780	ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl cis-trans isomerase	S.X.	H.G.	Please select
0.49	69.7	Ta.822.2.S1_x_at	CD901100	-	-	1e-90	At4g40040	histone H3.2	S.X.	H.G.	Please select
0.48	69.0	Ta.4770.1.S1_x_at	CK162188	-	-	4e-1	At2g28105	-	S.X.	H.G.	Please select
0.44	64.5	Ta.4980.1.S1_at	CK213203	-	-	9e+0	At5g51990	CBF4 (C- REPEAT-BINDING FACTOR 4)	S.X.	H.G.	Please select
0.44	64.5	Ta.8146.1.S1_at	BJ320719	-	-	6e-30	At2g47470	UNE5 (UNFERTILIZED EMBRYO SAC 5)	S.X.	H.G.	Please select
0.43	62.2	Ta.9607.1.A1_a_at	CA708572	-	-	5e+0	At5g24510	60s acidic ribosomal protein P1, putative	S.X.	H.G.	Please select
0.43	62.2	Ta.6402.1.S1_at	CK151576	-	-	2e-1	At3g45280	SYP72 (SYNTAXIN OF PLANTS 72)	S.X.	H.G.	Please select
0.42	60.9	Ta.22845.1.S1_at	BJ215922	tat binding protein	-	7e-54	At1g09100	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.0	96.3	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8	93.6	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7	93.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	0	708	Ta.21086.1.S1_a_at	CD864763	-	-	4e-38	At2g20930	-	C.G.	S.X.	Please select
0.09	1e-49	196	TaAffx.143996.1.S1_s_at	AJ272181.1	-	-	4e+0	At2g31180	MYB14 (MYB DOMAIN PROTEIN 14)	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.37.S1_at	BJ217304	-	-	4e+0	At4g09730	DEAD/DEAH box helicase, putative	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.55.S1_at	BJ221175	-	-	3e-1	At4g04750	carbohydrate transmembrane transporter/ sugar:hydrogen symporter	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.54.S1_at	BJ261997	-	-	1e+0	At2g46140	late embryogenesis abundant protein, putative / LEA protein, putative	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.56.S1_at	BJ216147	-	-	3e-1	At1g25530	lysine and histidine specific transporter, putative	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.42.S1_at	BJ219079	-	-	4e+0	At5g24920	AtGDU5 (Arabidopsis thaliana GLUTAMINE DUMPER 5)	C.G.	S.X.	Please select
0.18	1e-49	196	TaAffx.128418.41.S1_at	BJ251384	-	-	4e+0	At1g02630	equilibrative nucleoside transporter, putative (ENT8)	C.G.	S.X.	Please select
0.18	1e-49	196	Ta.6897.2.A1_x_at	BJ229594	-	-	1e+0	At1g32150	bZIP transcription factor family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	3e-16	85	Arabidopsis thaliana	At2g20930	816627	-	F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:intracellular;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.27	5e-16	85	Glycine max	Gma.16382.1.S1_at	AW317554	-	-	2e-61	At2g20930	-	C.G.	S.X.	Please select
0.56	5e-146	515	Hordeum vulgare	Contig10647_at	Contig10647	-	-	2e-46	At2g20930	-	C.G.	S.X.	Please select
0.42	2e-90	333	Oryza sativa	Os09g0541500	AK060244.1	-	Longin-like domain containing protein	3e-29	At2g20930	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	1e-10	67	Populus trichocarpa	PtpAffx.5486.1.S1_at	CV256117	hypothetical protein	-	1e-32	At2g20930	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	1e-16	85	Vitis vinifera	1617590_s_at	CF513756	hypothetical protein LOC100241847	-	3e-26	At2g20930	-	C.G.	S.X.	Please select
0.40	3e-101	367	Zea mays	Zm.16350.1.S1_at	CF349260	hypothetical protein LOC100273959	-	6e-31	At2g20930	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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