Gene omics information

Query gene ID	Ta.21086.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.69	86.9	Ta.21086.1.S1_a_at	CD864763	-	-	4e-38	At2g20930	-	S.X.	H.G.	Please select
0.85	93.8	Ta.21374.1.S1_at	CD873343	-	-	5e-38	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	S.X.	H.G.	Please select
0.80	92.2	Ta.21374.1.S1_x_at	CD873343	-	-	5e-38	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	S.X.	H.G.	Please select
0.70	87.2	Ta.10624.1.S1_at	BJ311688	-	-	5e-4	At2g47960	unknown protein	S.X.	H.G.	Please select
0.69	86.9	Ta.14707.1.S1_at	CD870546	Eukaryotic initiation factor 4E p26 subunit	-	1e-7	At1g29550	eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative	S.X.	H.G.	Please select
0.61	82.0	Ta.8245.1.S1_at	CD922906	-	-	2e-35	At1g04810	26S proteasome regulatory subunit, putative	S.X.	H.G.	Please select
0.55	76.8	Ta.6566.1.S1_at	CD914098	-	-	3e-71	At2g20140	26S protease regulatory complex subunit 4, putative	S.X.	H.G.	Please select
0.52	73.7	Ta.14429.1.S1_a_at	BJ215467	-	-	1e-20	At1g21720	PBC1 (PROTEASOME BETA SUBUNIT C1)	S.X.	H.G.	Please select
0.50	72.4	Ta.14393.1.S1_at	CK156758	-	-	8e-35	At2g27020	PAG1	S.X.	H.G.	Please select
0.45	65.2	Ta.808.1.S1_at	BJ217235	HBP-1b	-	2e-5	At3g12250	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.5	96.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8	93.6	GSM138213	genotype C10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM138156	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM138205	genotype H8 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM111228	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.4	92.0	GSM111198	genotype A77 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	0	708	Ta.21086.2.S1_x_at	BJ307886	-	-	3e-16	At2g20930	-	C.G.	S.X.	Please select
0.43	2e-98	359	TaAffx.83965.1.S1_at	CA647189	-	-	6e-27	At2g20930	-	C.G.	S.X.	Please select
0.06	1e-22	107	Ta.5511.1.S1_at	CK215160	-	-	3e+1	At5g18690	AGP25 (ARABINOGALACTAN PROTEINS 25)	C.G.	S.X.	Please select
0.05	3e-20	99	TaAffx.16936.1.S1_at	CK216481	fasciclin-like protein FLA16 /// fasciclin-like protein FLA17	-	2e+0	At3g54560	HTA11	C.G.	S.X.	Please select
0.05	1e-19	97	Ta.19774.1.S1_at	BE216927	-	-	1e-1	At4g38580	ATFP6 (FARNESYLATED PROTEIN 6)	C.G.	S.X.	Please select
0.04	5e-19	95	TaAffx.761.1.S1_at	BF199757	-	-	1e-9	At5g01160	e-cadherin binding protein-related	C.G.	S.X.	Please select
0.04	5e-19	95	Ta.7457.1.S1_at	CK166374	-	-	3e+0	Atmg01260	-	C.G.	S.X.	Please select
0.06	2e-18	93	Ta.1655.2.S1_at	CA703594	-	-	1e-1	At4g28703	-	C.G.	S.X.	Please select
0.06	8e-18	91	Ta.27657.5.S1_x_at	BJ320258	-	-	1e-4	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.49	4e-38	159	Arabidopsis thaliana	At2g20930	816627	-	F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:intracellular;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.30	3e-46	186	Glycine max	Gma.16382.1.S1_at	AW317554	-	-	2e-61	At2g20930	-	C.G.	S.X.	Please select
0.74	0	789	Hordeum vulgare	Contig10647_at	Contig10647	-	-	2e-46	At2g20930	-	C.G.	S.X.	Please select
0.51	2e-146	519	Oryza sativa	Os09g0541500	AK060244.1	-	Longin-like domain containing protein	3e-29	At2g20930	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	1e-11	71	Populus trichocarpa	PtpAffx.5486.1.S1_at	CV256117	hypothetical protein	-	1e-32	At2g20930	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.32	5e-41	167	Vitis vinifera	1617590_s_at	CF513756	hypothetical protein LOC100241847	-	3e-26	At2g20930	-	C.G.	S.X.	Please select
0.49	4e-150	529	Zea mays	Zm.16350.1.S1_at	CF349260	hypothetical protein LOC100273959	-	6e-31	At2g20930	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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