Gene omics information

Query gene ID	Ta.21023.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.21023.1.S1_s_at	CA642252	-	-	1e+0	At5g49280	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.60	81.0	TaAffx.21371.1.S1_at	BJ318198	-	-	8e-10	At5g45170	CbbY protein-related	S.X.	H.G.	Please select
0.60	81.0	Ta.5949.1.S1_at	CD919637	-	-	6e-4	At3g54660	GR (GLUTATHIONE REDUCTASE)	S.X.	H.G.	Please select
0.55	76.8	TaAffx.21371.2.S1_s_at	CA741418	-	-	8e-11	At5g45170	CbbY protein-related	S.X.	H.G.	Please select
0.44	64.5	Ta.5949.1.S1_x_at	CD919637	-	-	6e-4	At3g54660	GR (GLUTATHIONE REDUCTASE)	S.X.	H.G.	Please select
0.29	39.2	Ta.19975.1.S1_x_at	CK211538	-	-	7e-6	At2g20270	glutaredoxin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	98.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.0	98.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.9	98.0	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM298080	Leaf tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	6e-141	500	Ta.5949.1.S1_at	CD919637	-	-	6e-4	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please select
0.42	6e-141	500	Ta.5949.1.S1_x_at	CD919637	-	-	6e-4	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.81369.1.S1_at	CA686927	-	-	1e+0	At1g66110	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.70061.7.S1_at	BJ265768	-	-	4e+0	At5g47630	mtACP3 (mitochondrial acyl carrier protein 3)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.58776.1.S1_at	CA616080	-	-	4e+0	At1g79770	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.9460.3.S1_s_at	BJ314937	-	-	7e-2	At5g20650	COPT5	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.9460.1.A1_at	BJ318172	-	-	2e-1	At5g20650	COPT5	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8885.1.A1_at	BQ162563	-	-	4e-4	At5g20150	SPX1 (SPX DOMAIN GENE 1)	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.28807.1.S1_a_at	CA616937	-	-	1e+0	At3g17800	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At5g49280	834988	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	32	Glycine max	GmaAffx.39264.1.A1_at	BE658944	-	-	1e-2	At2g35850	unknown protein	C.G.	S.X.	Please select
0.19	3e-101	367	Hordeum vulgare	Contig9527_at	Contig9527	-	-	6e-11	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please select
0.10	5e-35	149	Oryza sativa	Os03g0163300	AK103418.1	-	Glutathione reductase (Fragment)	2e-8	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-2	40	Populus trichocarpa	PtpAffx.212714.1.S1_s_at	pmrna24864	glutathione reductase	-	4e-86	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1616148_at	BQ800532	hypothetical protein LOC100255531	-	1e+0	At1g58480	-	C.G.	S.X.	Please select
0.13	2e-30	131	Zea mays	Zm.13920.1.S1_at	AJ006055.1	glutathione reductase	-	2e-10	At3g54660	GR (GLUTATHIONE REDUCTASE)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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