Gene omics information

Query gene ID	Ta.21013.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	74.9	Ta.21013.1.S1_at	CA641421	-	-	9e-2	At1g06475	unknown protein	S.X.	H.G.	Please select
0.43	62.2	Ta.24639.1.S1_x_at	CK199553	-	-	2e-3	At5g47090	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.18807.1.A1_at	CA642371	-	-	8e-2	At3g48460	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.38	54.7	Ta.9334.1.S1_x_at	BJ284138	-	-	3e+0	At3g49120	PRXCB (PEROXIDASE CB)	S.X.	H.G.	Please select
0.36	51.9	Ta.25842.1.A1_at	CD453610	-	-	1e+0	At1g31520	unknown protein	S.X.	H.G.	Please select
0.25	32.1	Ta.1579.1.A1_at	BQ904556	-	-	1e+0	At5g53880	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
44.9	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
41.9	99.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
21.3	99.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
17.0	99.6	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
14.8	99.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
11.6	99.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
10.7	99.2	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.3	99.2	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
10.3	99.2	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
10.0	99.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-4	46	Ta.26415.1.A1_at	CD490748	-	-	1e+0	At4g39880	ribosomal protein L23 family protein	C.G.	S.X.	Please select
0.03	6e-3	42	Ta.21112.1.S1_x_at	CK212584	-	-	1e-1	At1g06475	unknown protein	C.G.	S.X.	Please select
0.03	6e-3	42	Ta.21112.1.S1_at	CK212584	-	-	1e-1	At1g06475	unknown protein	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.111899.1.S1_x_at	CA664128	-	-	7e-2	At1g06475	unknown protein	C.G.	S.X.	Please select
0.02	9e-2	38	TaAffx.78545.1.S1_s_at	CK161752	-	-	2e-1	At1g06475	unknown protein	C.G.	S.X.	Please select
0.03	9e-2	38	TaAffx.112080.1.S1_s_at	CA627251	-	-	1e+0	At3g49570	LSU3 (RESPONSE TO LOW SULFUR 3)	C.G.	S.X.	Please select
0.04	4e-1	36	TaAffx.106302.1.S1_x_at	CA720594	type 1 non specific lipid transfer protein precursor	-	6e+0	At2g48130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.1555.1.S1_at	CA650650	-	-	3e+0	At2g16460	metal ion binding	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.1282.3.S1_x_at	BQ804735	type 1 non specific lipid transfer protein precursor	-	7e+0	At5g01870	lipid transfer protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	9e-2	38	Arabidopsis thaliana	At1g06475	2745744	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-1	36	Glycine max	GmaAffx.89654.1.A1_s_at	CK606070	protein disulfide isomerase-like protein	-	3e-5	At1g77510	ATPDIL1-2 (PDI-LIKE 1-2)	C.G.	S.X.	Please select
0.69	3e-77	287	Hordeum vulgare	Contig19320_at	Contig19320	-	-	9e-1	At1g06475	unknown protein	C.G.	S.X.	Please select
0.17	3e-9	63	Oryza sativa	Os08g0501900	AK063130.1	-	Conserved hypothetical protein	1e+0	At5g23750	remorin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	38	Populus trichocarpa	PtpAffx.120111.1.S1_s_at	CX185810	bromodomain protein	-	2e-33	At1g20670	DNA-binding bromodomain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	32	Vitis vinifera	1613100_at	CB978775	hypothetical protein LOC100262719	-	3e-1	At2g30130	ASL5	C.G.	S.X.	Please select
0.03	2e-4	46	Zea mays	Zm.9726.1.A1_at	BM332481	-	-	3e-1	At2g18210	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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