Gene omics information

Query gene ID	Ta.20696.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.20696.1.S1_at	BQ804501	-	-	1e+1	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	S.X.	H.G.	Please select
0.67	86.3	Ta.28600.2.S1_a_at	CA720107	-	-	1e-7	At3g45010	scpl48 (serine carboxypeptidase-like 48)	S.X.	H.G.	Please select
0.50	72.4	Ta.28600.3.S1_x_at	CA641063	-	-	4e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	S.X.	H.G.	Please select
0.44	64.5	Ta.28600.2.S1_at	CA720107	-	-	1e-7	At3g45010	scpl48 (serine carboxypeptidase-like 48)	S.X.	H.G.	Please select
0.27	35.6	Ta.5955.1.S1_a_at	CA653685	-	-	5e-1	At1g12810	proline-rich family protein	S.X.	H.G.	Please select
0.24	30.3	Ta.29481.1.S1_at	CK194207	-	-	1e-1	At1g72080	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	96.7	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM138213	genotype C10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM138166	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138197	genotype F82 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	1e-129	464	TaAffx.117217.1.S1_at	BQ608283	-	-	8e+0	At5g59140	SKP1 family protein	C.G.	S.X.	Please select
0.22	6e-113	408	Ta.20696.3.S1_s_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	C.G.	S.X.	Please select
0.22	6e-113	408	Ta.20696.3.S1_x_at	CA598744	-	-	4e+0	At5g04180	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	C.G.	S.X.	Please select
0.28	4e-83	309	Ta.20696.2.S1_at	CA635164	-	-	1e+0	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please select
0.38	6e-79	295	Ta.29481.1.S1_at	CK194207	-	-	1e-1	At1g72080	unknown protein	C.G.	S.X.	Please select
0.23	2e-60	234	TaAffx.106611.1.S1_at	CA715092	-	-	3e+0	At3g32960	unknown protein	C.G.	S.X.	Please select
0.24	1e-46	188	Ta.29481.2.S1_x_at	CA642586	-	-	3e-1	At4g20300	unknown protein	C.G.	S.X.	Please select
0.17	9e-41	169	TaAffx.9436.1.S1_at	CA683017	-	-	3e-1	At5g42460	-	C.G.	S.X.	Please select
0.15	1e-21	105	TaAffx.9436.2.S1_at	CA684345	-	-	1e+0	At3g60540	sec61beta family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e+1	32	Arabidopsis thaliana	At5g04180	830296	ACA3 (ALPHA CARBONIC ANHYDRASE 3)	F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:endomembrane system;MBPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+0	36	Glycine max	GmaAffx.42064.1.S1_at	BM892548	-	-	8e-1	At5g18362	unknown protein	C.G.	S.X.	Please select
0.36	9e-61	234	Hordeum vulgare	Contig8263_at	Contig8263	-	-	6e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	C.G.	S.X.	Please select
0.24	3e-54	214	Oryza sativa	Os03g0751600	AK105937.1	-	Heavy metal transport/detoxification proteindomain containing protein	9e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.01	1e+0	36	Populus trichocarpa	PtpAffx.77846.1.A1_s_at	CK091508	hypothetical protein	-	1e-16	At1g09770	ATCDC5 (ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	4e+0	32	Vitis vinifera	1621042_at	CB982490	hypothetical protein LOC100253543	-	1e+0	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	C.G.	S.X.	Please select
0.10	1e-19	97	Zea mays	Zm.16849.1.S1_at	AY105649.1	circumsporozoite protein	-	7e+0	At5g07840	ankyrin repeat family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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