Gene omics information

Query gene ID	Ta.2059.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.78	91.1	Ta.2059.2.S1_a_at	CD896628	-	-	4e-22	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	S.X.	H.G.	Please select
0.46	66.8	Ta.6666.1.S1_s_at	BQ170970	-	-	1e-11	At3g49420	Got1-like family protein	S.X.	H.G.	Please select
0.38	54.7	Ta.22112.1.S1_at	CA656254	-	-	2e-4	At3g56740	ubiquitin-associated (UBA)/TS-N domain-containing protein	S.X.	H.G.	Please select
0.38	54.7	Ta.20446.1.S1_at	BJ320690	-	-	3e-5	At1g16570	glycosyl transferase family 1 protein	S.X.	H.G.	Please select
0.37	53.0	Ta.3610.1.A1_at	CK153151	-	-	1e+0	At4g01640	-	S.X.	H.G.	Please select
0.37	53.0	TaAffx.9142.1.S1_at	CA610746	-	-	3e+1	At5g35631	unknown protein	S.X.	H.G.	Please select
0.37	53.0	Ta.13399.2.A1_at	CK199486	-	-	2e+1	At5g25415	unknown protein	S.X.	H.G.	Please select
0.35	49.8	Ta.9307.1.S1_a_at	CA641835	-	-	9e-10	At4g13360	catalytic	S.X.	H.G.	Please select
0.35	49.8	Ta.25764.1.S1_at	CD373831	-	-	6e+0	At5g67070	RALFL34 (ralf-like 34)	S.X.	H.G.	Please select
0.34	48.1	Ta.12481.1.S1_at	BQ172437	-	-	2e+0	At4g30620	unknown protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.5	99.1	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.2	99.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.7	98.9	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6	98.9	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6	98.9	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.8	98.4	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6	98.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6	98.3	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	4e-19	95	Ta.2059.3.S1_a_at	BQ172140	-	-	6e-5	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.58101.1.S1_at	CA622434	-	-	4e+0	At3g29000	calcium-binding EF hand family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.4669.1.S1_at	CA735057	-	-	2e+0	At4g21310	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.4002.1.S1_at	BG906274	-	-	6e-1	At4g38240	CGL1 (COMPLEX GLYCAN LESS 1)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.974.1.S1_at	BE516580	-	-	2e+0	At1g74200	AtRLP16 (Receptor Like Protein 16)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.9798.1.S1_at	AY123416.1	-	-	1e-26	At1g22450	COX6B (CYTOCHROME C OXIDASE 6B)	C.G.	S.X.	Please select
0.01	6e+0	32	TaAffx.68652.1.S1_at	BJ319038	-	-	3e-9	At4g31920	ARR10 (ARABIDOPSIS RESPONSE REGULATOR 10)	C.G.	S.X.	Please select
0.03	6e+0	32	Ta.6555.2.S1_at	CA630372	-	-	1e+0	At1g23530	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	32	Ta.25578.1.S1_a_at	AJ613729	-	-	2e-3	At5g66070	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	4e-22	105	Arabidopsis thaliana	At5g65620	836688	peptidase M3 family protein / thimet oligopeptidase family protein	F:metalloendopeptidase activity;P:proteolysis;C:cytosol, chloroplast, chloroplast stroma;BOFMPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	6e-22	105	Glycine max	Gma.5903.2.S1_a_at	AW433295	-	-	8e-38	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.32	0	652	Hordeum vulgare	Contig4070_s_at	Contig4070	-	-	4e-22	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.20	3e-89	329	Oryza sativa	Os02g0830100	AK065077.1	-	Oligopeptidase A	7e-24	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	1e-29	131	Populus trichocarpa	Ptp.3296.1.S1_s_at	CV255955	hypothetical protein	-	1e-73	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	1e-16	85	Vitis vinifera	1615292_at	CF214583	similar to oligopeptidase A	-	1e-37	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.32	4e-91	333	Zea mays	Zm.3613.1.A1_at	BG841007	hypothetical protein LOC100273532	-	4e-24	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage