CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.20537.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 98.5 Ta.20537.1.S1_x_at CA648311 - - 5e-4 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) S.X. H.G.
0.30 40.9 Ta.7146.1.S1_at BJ321579 - - 3e+0 At5g62100 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2) S.X. H.G.
0.27 35.6 Ta.3207.2.S1_a_at CD889824 - - 4e-5 At5g08080 SYP132 (SYNTAXIN OF PLANTS 132) S.X. H.G.
0.26 33.6 Ta.7690.1.S1_at BJ282564 - - 1e+0 At1g09380 integral membrane family protein / nodulin MtN21-related S.X. H.G.
0.26 33.6 Ta.2880.1.S1_at CA709110 Zinc-finger motif - 7e-10 At4g22140 DNA binding / protein binding / zinc ion binding S.X. H.G.
0.23 29.0 Ta.3771.1.S1_at BQ804584 - - 6e-1 At5g48680 sterile alpha motif (SAM) domain-containing protein S.X. H.G.
0.23 29.0 TaAffx.130819.1.A1_at BG607589 - - 4e-9 At3g02290 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.23 29.0 Ta.7620.1.A1_at BJ321853 - - 5e+0 At1g53543 unknown protein S.X. H.G.
0.23 29.0 Ta.19423.1.S1_a_at CD934753 - - 2e-36 At5g54960 PDC2 (pyruvate decarboxylase-2) S.X. H.G.
0.21 25.5 Ta.4305.1.S1_at CD897967 - - 7e+0 At5g48660 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.5 99.3 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
9.5 99.1 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
8.1 98.8 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
6.7 98.4 GSM314286 tissue type: 22 DAP embryo - rep3 GSE12508 Transcription patterns during wheat development
6.4 98.2 GSM314285 tissue type: 22 DAP embryo - rep2 GSE12508 Transcription patterns during wheat development
5.8 97.9 GSM314284 tissue type: 22 DAP embryo - rep1 GSE12508 Transcription patterns during wheat development
5.0 97.4 GSM139912 Anther pre-meiosis rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6 97.0 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
4.3 96.7 GSM314271 tissue type: immature inflorescence - rep3 GSE12508 Transcription patterns during wheat development
4.0 96.3 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 1263 Ta.20537.1.S1_at CA648311 - - 5e-4 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) C.G. S.X.
0.45 7e-99 361 Ta.20537.2.S1_at BJ239908 - - 3e-1 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) C.G. S.X.
0.21 3e-61 236 Ta.3325.1.S1_at BJ241739 - - 7e-25 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.20 7e-59 228 Ta.4075.1.S1_s_at BT009078.1 - - 4e-11 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) C.G. S.X.
0.20 7e-59 228 Ta.4075.1.S1_at BT009078.1 - - 4e-11 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) C.G. S.X.
0.16 5e-38 159 Ta.2879.1.S1_at BT009265.1 - - 2e-19 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.09 1e-7 57 Ta.24093.1.S1_at BT009029.1 CCAAT-box binding factor HAP3 B domain - 6e-13 At1g21970 LEC1 (LEAFY COTYLEDON 1) C.G. S.X.
0.04 6e-7 56 Ta.28445.1.S1_at CF133117 - - 8e+0 At2g39630 glycosyl transferase family 2 protein C.G. S.X.
0.04 6e-7 56 Ta.28445.1.S1_x_at CF133117 - - 8e+0 At2g39630 glycosyl transferase family 2 protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 5e-4 46 Arabidopsis thaliana At3g53340 824502 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:intracellular, nucleus;MPFO - - - C.G. S.X.
0.18 1e-17 91 Glycine max PsAffx.psMA006xH17f_at PsAffx.psMA006xH17f - - 5e-1 At2g38880 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1) C.G. S.X.
0.22 1e-61 236 Hordeum vulgare Contig11971_at Contig11971 - - 7e-25 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.35 4e-108 393 Oryza sativa Os05g0573500 AB095440.1 - HAP3 2e-3 At3g53340 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10) C.G. S.X.
0.11 2e-1 38 Populus trichocarpa Ptp.1172.1.S1_s_at CV275494 hypothetical protein - 2e-46 At4g14540 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) C.G. S.X.
0.05 2e-4 46 Vitis vinifera 1614136_at CB347754 hypothetical protein LOC100246668 - 7e-55 At5g47670 NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6) C.G. S.X.
0.23 2e-38 159 Zea mays Zm.13055.1.S1_at CF637576 - - 2e-14 At4g14540 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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