CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.20463.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 Ta.20463.1.S1_at BT009342.1 - - 2e-5 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase S.X. H.G.
0.77 90.8 Ta.6256.1.S1_at BJ265629 - - 2e-7 At4g11120 translation elongation factor Ts (EF-Ts), putative S.X. H.G.
0.60 81.0 Ta.7894.1.S1_at CA678008 - - 1e-27 At2g45240 MAP1A (METHIONINE AMINOPEPTIDASE 1A) S.X. H.G.
0.43 62.2 Ta.1529.1.S1_at CK153906 - - 5e-21 At4g39280 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative S.X. H.G.
0.36 51.9 Ta.14560.1.S1_at BJ274621 - - 2e-40 At5g63400 ADK1 (ADENYLATE KINASE 1) S.X. H.G.
0.29 39.2 Ta.165.1.S1_at BJ317802 eIF-2 beta subunit - 3e-43 At5g20920 EIF2 BETA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.2 97.5 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8 97.2 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6 97.0 GSM139916 Anther leptotene-pachytene rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5 96.9 GSM298061 Crown tissue of Harnesk at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.4 96.8 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4 96.8 GSM298062 Crown tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
4.3 96.7 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2 96.6 GSM314251 tissue type: germinating seed, coleoptile - rep1 GSE12508 Transcription patterns during wheat development
4.1 96.4 GSM298059 Crown tissue of Harnesk at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
3.8 96.0 GSM314252 tissue type: germinating seed, coleoptile - rep2 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 0 1112 TaAffx.9577.1.S1_at BJ214458 - - 3e-10 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.18 4e-49 196 TaAffx.9577.3.S1_at CA710586 - - 6e-11 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.14 3e-22 107 TaAffx.9577.2.S1_at CA696477 - - 1e+0 At4g10265 wound-responsive protein, putative C.G. S.X.
0.03 1e-9 65 Ta.9411.3.S1_x_at CA499635 - - 2e-4 At1g16810 unknown protein C.G. S.X.
0.03 1e-9 65 Ta.8551.1.S1_at BQ162047 - - 8e-3 At5g23300 PYRD (pyrimidine d) C.G. S.X.
0.02 1e-9 65 Ta.29926.1.S1_at CK215883 - - 7e-17 At3g10350 anion-transporting ATPase family protein C.G. S.X.
0.03 1e-9 65 Ta.28384.1.S1_at CA735041 - - 1e-2 At5g45810 CIPK19 (CBL-INTERACTING PROTEIN KINASE 19) C.G. S.X.
0.03 1e-9 65 Ta.28384.1.S1_s_at CA735041 - - 1e-2 At5g45810 CIPK19 (CBL-INTERACTING PROTEIN KINASE 19) C.G. S.X.
0.02 1e-9 65 Ta.1573.1.S1_at CK153469 - - 5e-45 At5g63400 ADK1 (ADENYLATE KINASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-5 52 Arabidopsis thaliana At5g27470 832806 seryl-tRNA synthetase / serine--tRNA ligase F:serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:response to cadmium ion, seryl-tRNA aminoacylation;C:cytosol;OBMFAP - - - C.G. S.X.
0.16 1e-9 65 Glycine max Gma.9981.1.S1_at CD398725 - - 9e-46 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.84 0 2375 Hordeum vulgare Contig5144_at Contig5144 - - 7e-14 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.71 0 1043 Oryza sativa Os01g0559100 AK105730.1 - Seryl-tRNA synthetase (EC 6.1.1.11) 1e-3 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.15 4e-16 87 Populus trichocarpa PtpAffx.17411.1.S1_at CV242125 hypothetical protein - 6e-45 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.17 3e-16 85 Vitis vinifera 1613593_at CB975406 hypothetical protein LOC100261399 - 9e-34 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
0.58 0 739 Zea mays Zm.15927.1.S1_at CO523705 seryl-tRNA synthetase1 - 5e-9 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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