CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.19604.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 98.5 Ta.19604.1.S1_at CA653992 - - 8e+0 At5g46795 MSP2 (microspore-specific promoter 2) S.X. H.G.
0.38 54.7 Ta.11338.3.S1_x_at CA647367 - - 4e+0 At3g47200 unknown protein S.X. H.G.
0.34 48.1 Ta.13695.3.S1_x_at CA699811 - - 4e+0 At3g56130 biotin/lipoyl attachment domain-containing protein S.X. H.G.
0.33 46.9 Ta.28719.1.A1_at CA722261 - - 1e+0 At5g61890 AP2 domain-containing transcription factor family protein S.X. H.G.
0.32 44.4 Ta.1862.2.S1_x_at CA690286 - - 1e-12 At1g53400 unknown protein S.X. H.G.
0.32 44.4 Ta.5027.1.S1_at CD927425 - - 3e-1 At4g18720 transcription elongation factor-related S.X. H.G.
0.32 44.4 TaAffx.110345.1.S1_at CA660143 - - 4e+0 At5g24270 SOS3 (SALT OVERLY SENSITIVE 3) S.X. H.G.
0.27 35.6 Ta.622.3.S1_at CA692932 AML15 - 7e-1 At4g18120 AML3 (ARABIDOPSIS MEI2-LIKE 3) S.X. H.G.
0.26 33.6 Ta.983.1.S1_at BT009628.1 - - 4e-4 At4g04800 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein S.X. H.G.
0.24 30.3 Ta.3335.1.S1_at CD890295 - - 2e+0 At3g53520 UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.5 98.6 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
7.4 98.6 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5 98.3 GSM298091 Leaf tissue of Solstice at 9 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.1 98.1 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.1 98.1 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1 98.1 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
5.7 97.9 GSM143507 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.6 97.8 GSM298094 Crown tissue of Solstice at 9 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
5.2 97.5 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9 97.3 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-33 141 Ta.9848.1.S1_at BJ233114 - - 2e-1 At2g40995 - C.G. S.X.
0.22 1e-7 56 Ta.25656.1.A1_at CD373724 - - 2e-2 At2g23620 MES1 (METHYL ESTERASE 1) C.G. S.X.
0.04 1e-1 36 Ta.872.2.S1_x_at CA659016 - - 7e-2 At5g16400 ATF2 C.G. S.X.
0.04 1e-1 36 Ta.872.3.S1_at CA655834 - - 1e+0 At1g61920 unknown protein C.G. S.X.
0.04 1e-1 36 Ta.872.2.S1_at CA659016 - - 7e-2 At5g16400 ATF2 C.G. S.X.
0.04 1e-1 36 Ta.872.3.S1_x_at CA655834 - - 1e+0 At1g61920 unknown protein C.G. S.X.
0.02 1e-1 36 Ta.6678.1.S1_at BJ275751 - - 7e-1 At5g58900 myb family transcription factor C.G. S.X.
0.05 1e-1 36 Ta.5042.1.A1_at CA690531 - - 9e-1 At2g23320 WRKY15 C.G. S.X.
0.04 5e-1 34 TaAffx.32318.1.S1_at CA597053 - - 4e+0 At3g55790 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e+0 30 Arabidopsis thaliana At5g46795 834723 MSP2 (microspore-specific promoter 2) F:molecular_function unknown;P:pollen development;C:chloroplast;MPO - - - C.G. S.X.
0.05 2e-1 36 Glycine max PsAffx.C31000067_at PsAffx.C31000067 - - 4e+0 At5g40260 nodulin MtN3 family protein C.G. S.X.
0.05 1e-2 38 Hordeum vulgare Contig13949_at Contig13949 - - 1e+0 At3g45990 actin-depolymerizing factor, putative C.G. S.X.
0.06 2e-1 36 Oryza sativa Os08g0474800 9636.m03717 - Esterase/lipase/thioesterase domain containingprotein 6e-1 At4g36500 unknown protein C.G. S.X.
0.05 7e-1 34 Populus trichocarpa PtpAffx.208665.1.S1_at pmrna17189 hypothetical protein - 7e-1 At5g17590 prothymosin alpha-related C.G. S.X.
0.05 2e+0 30 Vitis vinifera 1616570_at CF568974 - - 1e+0 At5g08220 unknown protein C.G. S.X.
0.04 8e-1 32 Zea mays Zm.8468.1.A1_at BM074266 gibberellin receptor GID1L2 - 6e+0 At3g45480 zinc ion binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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