CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.19591.2.A1_a_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.0 Ta.19591.2.A1_a_at CA651113 - - 4e+0 At5g11500 unknown protein S.X. H.G.
0.67 86.3 TaAffx.105943.1.S1_at CA727514 - - 2e+1 At5g07470 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3) S.X. H.G.
0.63 83.1 TaAffx.64914.1.S1_at BJ270115 - - 4e+0 At1g51915 cryptdin protein-related S.X. H.G.
0.63 83.1 Ta.16453.1.S1_at CA606648 - - 1e+0 At4g29650 cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase S.X. H.G.
0.57 79.2 TaAffx.112440.1.S1_at CA621396 - - 4e-1 At3g11050 ATFER2 (ferritin 2) S.X. H.G.
0.57 79.2 TaAffx.105981.1.S1_at CA727065 - - 3e-1 At4g11870 unknown protein S.X. H.G.
0.46 66.8 TaAffx.108544.1.S1_x_at CA663841 - - 1e+1 At4g27270 quinone reductase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.4 99.6 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
16.6 99.6 GSM143522 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.9 99.4 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.7 99.3 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.7 99.2 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.4 99.2 GSM143503 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.3 99.2 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.3 99.2 GSM143521 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.1 99.2 GSM143516 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.3 99.0 GSM143510 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 971 Ta.19591.2.A1_at CA651113 - - 4e+0 At5g11500 unknown protein C.G. S.X.
0.28 2e-82 305 Ta.19591.1.A1_at CD873269 - - 6e-1 At1g06040 STO (SALT TOLERANCE) C.G. S.X.
0.26 2e-48 192 TaAffx.4338.1.S1_at CA609091 - - 2e+0 At5g06490 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.16 7e-11 67 TaAffx.4338.2.S1_at CA679758 - - 3e-1 At1g23110 unknown protein C.G. S.X.
0.13 7e-11 67 Ta.20421.1.S1_at CD864906 - - 3e+0 At1g08350 endomembrane protein 70 family protein C.G. S.X.
0.06 7e-5 48 Ta.21069.1.S1_a_at CA609019 - - 5e+0 At3g08990 yippee family protein C.G. S.X.
0.06 7e-5 48 Ta.21069.1.S1_x_at CA609019 - - 5e+0 At3g08990 yippee family protein C.G. S.X.
0.07 3e-1 36 TaAffx.9134.1.S1_at CA610954 - - 4e+0 At1g31190 IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1) C.G. S.X.
0.03 1e+0 34 Ta.29232.1.S1_s_at CA731551 - - 1e+0 At1g27130 ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g11500 831022 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPV - - - C.G. S.X.
0.05 2e-6 54 Glycine max GmaAffx.92098.1.S1_s_at CF807823 - - 4e-1 At1g55990 glycine-rich protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig9351_s_at Contig9351 - - 1e+0 At5g42070 unknown protein C.G. S.X.
0.14 2e-28 127 Oryza sativa Os10g0370500 AK065000.1 - Glycoside hydrolase, family 5 protein 2e-2 At5g37550 unknown protein C.G. S.X.
0.05 9e-2 38 Populus trichocarpa PtpAffx.204186.1.S1_at pmrna8239 hypothetical protein - 8e+0 At5g64100 peroxidase, putative C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1619196_at CB916796 - - 1e-15 At1g12070 Rho GDP-dissociation inhibitor family protein C.G. S.X.
0.10 5e-7 54 Zea mays Zm.6450.1.S1_at CF245049 cellulase containing protein - 4e+0 At3g04890 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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