CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.19525.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.19525.1.S1_at CA653006 - - 7e-1 At3g06970 RNA binding / nucleic acid binding / nucleotide binding S.X. H.G.
0.80 92.2 TaAffx.16905.1.A1_at CK214896 - - 3e-1 At5g53880 unknown protein S.X. H.G.
0.77 90.8 TaAffx.82723.1.A1_at BJ322693 - - 2e+0 At3g29080 unknown protein S.X. H.G.
0.73 89.1 Ta.7351.2.S1_at BJ318902 - - 2e-2 At1g18790 RWP-RK domain-containing protein S.X. H.G.
0.61 82.0 Ta.7351.2.S1_x_at BJ318902 - - 2e-2 At1g18790 RWP-RK domain-containing protein S.X. H.G.
0.33 46.9 Ta.10451.2.A1_x_at BJ272822 - - 2e+0 At5g23070 thymidine kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.9 99.8 GSM138175 genotype A81 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.3 99.4 GSM138181 genotype A35 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.7 99.2 GSM138149 genotype F29 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.2 99.2 GSM138192 genotype B33 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.0 99.1 GSM138178 genotype A88 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.6 99.1 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.0 98.8 GSM138189 genotype F38a developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.7 98.7 GSM111144 genotype AC Domain developing seed at 5 days after anthesis, biological rep1 GSE4929 wheat expression level polymorphism study parental genotypes 2 biological reps
7.1 98.5 GSM138174 genotype A81 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.9 98.4 GSM138180 genotype A35 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 7e-35 147 Ta.11707.1.A1_x_at BQ170638 - - 3e+0 At3g01328 - C.G. S.X.
0.02 5e-2 38 Ta.22248.1.S1_x_at BJ272091 - - 4e-3 At3g18170 transferase, transferring glycosyl groups C.G. S.X.
0.03 2e-1 36 Ta.28641.1.S1_x_at CD454490 - - 2e+0 At5g24790 unknown protein C.G. S.X.
0.02 2e-1 36 Ta.27508.1.A1_at CA703452 - - 7e-38 At1g73590 PIN1 (PIN-FORMED 1) C.G. S.X.
0.02 2e-1 36 Ta.27508.1.S1_at BT009237.1 - - 7e-38 At1g73590 PIN1 (PIN-FORMED 1) C.G. S.X.
0.04 8e-1 34 TaAffx.9611.1.S1_at CA593771 - - 1e+0 At3g11110 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 8e-1 34 TaAffx.94679.1.S1_at CA745144 - - 2e+0 At4g36910 LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) C.G. S.X.
0.04 8e-1 34 TaAffx.66656.1.S1_at BG907674 - - 3e+0 At4g30993 unknown protein C.G. S.X.
0.02 8e-1 34 TaAffx.467.1.S1_at CD911167 - - 2e-7 At3g06190 BPM2 (BTB-POZ AND MATH DOMAIN 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-1 34 Arabidopsis thaliana At3g06970 819882 RNA binding / nucleic acid binding / nucleotide binding F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBV - - - C.G. S.X.
0.04 4e+0 32 Glycine max PsAffx.psMA010xM24f_at PsAffx.psMA010xM24f - - 4e+0 At1g02405 proline-rich family protein C.G. S.X.
0.30 3e-57 220 Hordeum vulgare HW03D17u_at HW03D17u - - 4e+0 At5g65300 unknown protein C.G. S.X.
0.16 9e-36 151 Oryza sativa Os03g0836300 AK061174.1 - Harpin-induced 1 domain containing protein 8e-3 At5g47150 YDG/SRA domain-containing protein C.G. S.X.
0.04 4e+0 32 Populus trichocarpa Ptp.4871.1.S1_at DN500683 hypothetical protein - 2e-6 At1g52565 unknown protein C.G. S.X.
0.06 8e-1 32 Vitis vinifera 1612091_at CF414325 hypothetical protein LOC100248801 - 1e-3 At1g44760 universal stress protein (USP) family protein C.G. S.X.
0.04 1e+0 32 Zea mays Zm.18556.1.S1_at CO049296 versicolorin reductase - 3e+0 At1g11230 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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