Gene omics information

Query gene ID	Ta.19063.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	Ta.19063.1.S1_at	CA646746	-	-	4e+0	At5g23290	PDF5 (PREFOLDIN 5)	S.X.	H.G.	Please select
0.40	58.4	TaAffx.59306.1.S1_at	CA603735	-	-	1e+0	At4g22570	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	S.X.	H.G.	Please select
0.19	22.4	TaAffx.112465.1.S1_s_at	CA623726	-	-	3e-13	At4g00360	CYP86A2 (CYTOCHROME P450 86 A2)	S.X.	H.G.	Please select
0.14	15.8	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	S.X.	H.G.	Please select
0.05	6.7	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	S.X.	H.G.	Please select
0.04	5.8	TaAffx.31313.1.S1_at	CA617546	-	-	1e+1	At3g52561	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.2	99.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
10.3	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.1	99.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.7	98.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.9	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM246397	SB57_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	4e-74	278	TaAffx.25179.1.S1_at	CA704985	-	-	9e-1	At1g62060	unknown protein	C.G.	S.X.	Please select
0.13	2e-27	123	Ta.27689.1.A1_at	CD938721	-	-	3e+0	At1g24380	unknown protein	C.G.	S.X.	Please select
0.14	8e-8	57	TaAffx.29846.1.S1_at	CA634182	-	-	4e+0	At3g15450	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.14395.2.S1_a_at	CA652559	-	-	2e+0	At1g79650	RAD23	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.122592.1.S1_at	CD863543	-	-	1e-16	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.76.3.S1_at	CA680784	-	-	1e+0	At5g49510	PDF3 (PREFOLDIN 3)	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.50270.1.S1_at	CA737897	-	-	7e+0	At5g24500	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	32	TaAffx.10527.2.S1_at	BJ210003	-	-	9e-4	At1g09830	phosphoribosylamine--glycine ligase (PUR2)	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.8846.1.S1_at	BQ162503	-	-	3e-15	At3g46740	TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At5g23290	832393	PDF5 (PREFOLDIN 5)	F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOAPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.65411.1.S1_at	BU761766	-	-	2e-1	At3g55790	unknown protein	C.G.	S.X.	Please select
0.03	8e+0	30	Hordeum vulgare	HV_CEa0014A18r2_at	HV_CEa0014A18r2	-	-	8e-1	At2g10550	-	C.G.	S.X.	Please select
Os04g0512750	0.02	2e+0	Oryza sativa	Os01g0600600	NM_192634.1	-	-	6e-2	At2g45440	DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE)	C.G.	S.X.	Please select
0.03	2e+0	34	Populus trichocarpa	PtpAffx.202417.1.S1_at	pmrna4853	hypothetical protein	-	5e+0	At4g11630	ribosomal protein L19 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1619878_at	CB970099	-	-	1e+0	At1g09935	phosphoglycerate/bisphosphoglycerate mutase family protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.932.1.A1_at	AI795506	-	-	3e+0	At5g22430	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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