Gene omics information

Query gene ID	Ta.18833.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.18833.1.S1_at	CA642739	-	-	2e+0	At5g19260	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.12681.1.S1_at	CK154789	-	-	8e-5	At2g26280	CID7	S.X.	H.G.	Please select
0.50	72.4	TaAffx.43438.1.A1_s_at	BQ168743	-	-	4e+0	At3g22930	calmodulin, putative	S.X.	H.G.	Please select
0.33	46.9	TaAffx.49067.1.S1_at	CA637984	-	-	1e-1	At5g25360	unknown protein	S.X.	H.G.	Please select
0.30	40.9	Ta.3839.1.S1_at	BJ287608	-	-	6e-1	At2g43950	OEP37	S.X.	H.G.	Please select
0.20	24.0	Ta.3839.2.S1_x_at	CA721935	-	-	5e-1	At2g43950	OEP37	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.8	98.9	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.5	98.6	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.5	98.6	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.1	98.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.7	97.9	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.4	97.7	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.2	97.5	GSM143526	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.2	97.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.1	97.5	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	3e-76	284	Ta.10653.1.S1_at	BQ166196	-	-	3e-1	At4g04925	unknown protein	C.G.	S.X.	Please select
0.05	5e-1	34	Ta.26202.1.S1_at	CD452706	-	-	2e+1	At5g15750	RNA-binding S4 domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.27535.1.A1_at	BT009144.1	-	-	1e-4	At1g09090	ATRBOHB (respiratory burst oxidase homolog B)	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.27535.1.S1_at	BT009144.1	-	-	1e-4	At1g09090	ATRBOHB (respiratory burst oxidase homolog B)	C.G.	S.X.	Please select
0.03	8e+0	30	TaAffx.91894.1.S1_at	BJ294717	-	-	2e-6	At2g34480	60S ribosomal protein L18A (RPL18aB)	C.G.	S.X.	Please select
0.05	8e+0	30	TaAffx.83704.1.S1_at	CA653453	-	-	2e+0	At5g44010	unknown protein	C.G.	S.X.	Please select
0.05	8e+0	30	TaAffx.83704.1.S1_x_at	CA653453	-	-	2e+0	At5g44010	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.25434.1.S1_at	CA700096	-	-	4e+0	At1g73650	oxidoreductase, acting on the CH-CH group of donors	C.G.	S.X.	Please select
0.04	8e+0	30	TaAffx.114076.2.S1_x_at	CA714279	-	-	6e-5	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	32	Arabidopsis thaliana	At5g19260	832046	unknown protein	F:unknown;P:unknown;C:unknown;MOFPBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-1	36	Glycine max	Gma.17380.1.S1_at	BM094051	-	-	7e-1	At4g27490	3' exoribonuclease family domain 1-containing protein	C.G.	S.X.	Please select
0.04	1e+0	32	Hordeum vulgare	Contig4894_at	Contig4894	-	-	1e+0	At1g75717	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Oryza sativa	Os06g0725000	AK111790.1	-	Ntdin	5e-1	At5g66040	STR16 (SULFURTRANSFERASE PROTEIN 16)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	3e+0	32	Populus trichocarpa	PtpAffx.204263.1.S1_at	pmrna8392	-	-	6e-6	At2g21200	auxin-responsive protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+0	30	Vitis vinifera	1617120_s_at	CF208320	hypothetical protein LOC100265095	-	1e+0	At4g18593	dual specificity protein phosphatase-related	C.G.	S.X.	Please select
0.03	9e-1	32	Zea mays	Zm.5260.1.A1_at	BE453819	hypothetical protein LOC100276540	-	1e-10	At3g10140	RECA3 (recA homolog 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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