Gene omics information

Query gene ID	Ta.18801.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.18801.1.S1_at	CA642342	-	-	1e-1	At2g47540	pollen Ole e 1 allergen and extensin family protein	S.X.	H.G.	Please select
0.60	81.0	Ta.7882.1.S1_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	S.X.	H.G.	Please select
0.47	67.9	Ta.18807.1.A1_at	CA642371	-	-	8e-2	At3g48460	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.35	49.8	Ta.7882.1.S1_x_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	S.X.	H.G.	Please select
0.33	46.9	Ta.7882.2.S1_a_at	CA645408	-	-	1e+0	At2g04790	unknown protein	S.X.	H.G.	Please select
0.31	42.7	Ta.1800.1.S1_at	BE445382	-	-	4e+0	At3g55646	unknown protein	S.X.	H.G.	Please select
0.20	24.0	Ta.21013.1.S1_at	CA641421	-	-	9e-2	At1g06475	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
47.0	99.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
39.2	99.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
32.6	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
20.9	99.7	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
18.9	99.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
15.6	99.6	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
13.4	99.5	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
12.7	99.4	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
10.0	99.1	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.6	99.1	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	7e-81	301	TaAffx.31792.1.S1_at	CA607552	-	-	4e+0	At4g12140	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.14	2e-10	67	Ta.5153.1.S1_at	CA615740	-	-	2e+0	At1g17800	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.03	1e-2	42	Ta.25574.1.S1_x_at	CD490451	-	-	9e+0	At3g01940	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	38	Ta.27753.1.S1_at	CK205459	triosephosphat-isomerase	-	6e-23	At3g55440	TPI (TRIOSEPHOSPHATE ISOMERASE)	C.G.	S.X.	Please select
0.03	6e-1	36	Ta.16015.1.S1_at	BG314229	-	-	7e+0	At1g11850	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.14172.1.S1_at	CA643444	-	-	1e+1	At3g04880	DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.14172.2.S1_at	CA732759	-	-	2e+1	At4g31730	GDU1 (GLUTAMINE DUMPER 1)	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.14028.1.S1_at	BQ804731	-	-	3e-1	At4g26320	AGP13 (arabinogalactan protein 13)	C.G.	S.X.	Please select
0.03	6e-1	36	Ta.11486.1.A1_at	BQ170194	-	-	2e+1	At5g50930	DNA binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	38	Arabidopsis thaliana	At2g47540	819367	pollen Ole e 1 allergen and extensin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	8e-1	36	Glycine max	HgAffx.17461.1.S1_at	CB279927	-	-	6e+0	At5g36320	-	C.G.	S.X.	Please select
0.35	1e-102	373	Hordeum vulgare	Contig14215_at	Contig14215	-	-	4e+0	At3g18740	60S ribosomal protein L30 (RPL30C)	C.G.	S.X.	Please select
0.17	4e-19	97	Oryza sativa	Os05g0531200	AK103685.1	-	Pollen Ole e 1 allergen and extensin domaincontaining protein	2e+0	At5g61412	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.219669.1.S1_at	pmrna35636	-	-	1e+1	At5g11740	AGP15 (ARABINOGALACTAN PROTEIN 15)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	3e+0	32	Vitis vinifera	1619359_at	CF404659	hypothetical protein LOC100258799	-	3e-1	At5g24910	CYP714A1	C.G.	S.X.	Please select
0.24	1e-34	147	Zea mays	Zm.12077.1.A1_at	BM379970	hypothetical protein LOC100193845	-	2e+0	At2g16510	vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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