Gene omics information

Query gene ID Ta.18551.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.18551.1.S1_atCA648991--3e+0At5g44420PDF1.2S.X.H.G.
0.5072.4Ta.16983.2.S1_atCA642112--1e+0At5g60680unknown proteinS.X.H.G.
0.4666.8Ta.16953.1.A1_x_atCA606140--1e+0At2g02850ARPN (PLANTACYANIN)S.X.H.G.
0.4058.4TaAffx.9025.1.S1_atCA615839--5e-5At1g60730aldo/keto reductase family proteinS.X.H.G.
0.3549.8TaAffx.31813.1.S1_x_atCA607079--6e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)S.X.H.G.
0.3142.7Ta.19183.2.S1_atCA647961--3e+1At5g21920YGGT family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
166.7100.0GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
97.0100.0GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat development
86.9100.0GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat development
1.483.5GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
1.178.4GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
1.076.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
0.664.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
0.561.1GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat development
0.561.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
0.456.9GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.462e-78291TaAffx.31813.2.A1_atCA649947--4e+0At5g36960unknown proteinC.G.S.X.
0.579e-53206TaAffx.83697.1.S1_atCA653712--3e+0At5g25560zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.232e-35149TaAffx.31813.1.S1_x_atCA607079--6e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)C.G.S.X.
0.232e-35149TaAffx.31813.1.S1_atCA607079--6e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)C.G.S.X.
0.251e-2099Ta.1608.1.S1_atBE443827--6e+0At4g22550phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.426e-1787TaAffx.111552.2.S1_atCA638023--3e+0At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.259e-1683Ta.18790.1.S1_x_atCA642222--5e+0At1g74110CYP78A10C.G.S.X.
0.065e-238TaAffx.83763.1.S1_x_atCA651658--3e+0At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)C.G.S.X.
0.065e-238TaAffx.57046.1.S1_atCA637724--2e+1At5g42850-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Arabidopsis thalianaAt5g44420834469PDF1.2Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.---C.G.S.X.
0.044e+032Glycine maxGmaAffx.58761.1.S1_atBG043562--8e-1At4g27790calcium-binding EF hand family proteinC.G.S.X.
0.089e-1165Hordeum vulgareContig25029_atContig25029--4e+0At3g48231LCR48 (Low-molecular-weight cysteine-rich 48)C.G.S.X.
0.045e+032Oryza sativaOs07g0642000NM_188821.1--9e-4At1g18680HNH endonuclease domain-containing proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.22861.1.A1_atDN484892--3e+0At5g16486-C.G.S.X.
0.048e-132Vitis vinifera1611558_atCB345264--1e-74Atcg00660-C.G.S.X.
0.045e+030Zea maysZm.7336.1.A1_atAF371263.1hypothetical protein LOC100279133 /// 50kD gamma zein-2e-3At1g30460CPSF30C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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