CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.1852.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.1852.1.S1_at CA625220 - - 3e+0 At5g03170 FLA11 S.X. H.G.
0.67 86.3 Ta.3309.3.S1_x_at BE443725 - - 2e-11 At5g47570 unknown protein S.X. H.G.
0.60 81.0 Ta.3135.1.S1_at CK216213 - - 2e-6 At1g04630 MEE4 (maternal effect embryo arrest 4) S.X. H.G.
0.50 72.4 Ta.24916.2.S1_x_at CK164288 - - 4e-4 At4g21105 cytochrome-c oxidase/ electron carrier S.X. H.G.
0.44 64.5 Ta.24916.3.S1_x_at CA630515 - - 8e-2 At4g21105 cytochrome-c oxidase/ electron carrier S.X. H.G.
0.40 58.4 Ta.2188.1.S1_x_at BQ168938 - - 1e+0 At4g28020 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.9 94.0 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
2.4 92.0 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
2.3 91.5 GSM111212 genotype DH91 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.1 90.3 GSM138160 genotype A91 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.1 90.3 GSM111240 genotype F82 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.0 89.7 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
2.0 89.7 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
2.0 89.7 GSM314282 tissue type: 3-5 DAP caryopsis - rep2 GSE12508 Transcription patterns during wheat development
2.0 89.7 GSM111211 genotype B11 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.0 89.7 GSM138199 genotype C22 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 3e-102 373 TaAffx.78902.1.S1_at CA724983 - - 9e-1 At5g03170 FLA11 C.G. S.X.
0.14 3e-25 117 Ta.13767.1.S1_at AL820691 Fasciclin-like protein FLA13 - 2e-17 At3g03070 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.06 4e-12 73 Ta.6902.1.S1_x_at CA641546 - - 7e+0 At5g20010 RAN-1 C.G. S.X.
0.05 2e-11 71 Ta.7596.2.S1_a_at CA610997 - - 1e+0 At2g37560 ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2) C.G. S.X.
0.05 2e-11 71 Ta.22966.3.S1_x_at CA647486 - - 7e-2 At3g01260 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase C.G. S.X.
0.05 2e-11 71 Ta.22966.3.S1_at CA647486 - - 7e-2 At3g01260 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase C.G. S.X.
0.06 6e-11 69 TaAffx.113645.2.S1_at CA612825 - - 6e-2 At5g08030 glycerophosphoryl diester phosphodiesterase family protein C.G. S.X.
0.03 1e-9 65 TaAffx.116894.1.A1_x_at CA648930 - - 7e+0 At5g44720 molybdenum cofactor sulfurase family protein C.G. S.X.
0.03 1e-9 65 TaAffx.116894.1.A1_at CA648930 - - 7e+0 At5g44720 molybdenum cofactor sulfurase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 34 Arabidopsis thaliana At5g03170 831914 FLA11 F:unknown;P:unknown;C:anchored to membrane;PBOMAF - - - C.G. S.X.
0.02 8e-2 40 Glycine max GmaAffx.93619.1.S1_s_at CF809344 - - 1e+0 At4g29410 60S ribosomal protein L28 (RPL28C) C.G. S.X.
0.65 0 1168 Hordeum vulgare Contig8273_at Contig8273 - - 2e+0 At5g03170 FLA11 C.G. S.X.
0.34 1e-112 408 Oryza sativa Os01g0668100 AK105603.1 - Beta-Ig-H3/fasciclin domain containing protein 1e-1 At3g57500 unknown protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.221773.1.S1_s_at pmrna38824 hypothetical protein - 5e-27 At1g71220 EBS1 (EMS-mutagenized bri1 suppressor 1) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1619517_at CF202125.1 O-methyltransferase - 4e-1 At4g09000 14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) C.G. S.X.
0.27 3e-66 252 Zea mays Zm.3283.2.A1_a_at BM335982 hypothetical protein LOC100192072 - 2e+0 At3g46110 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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