CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.1842.2.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 Ta.1842.2.S1_at BJ321503 - - 5e-14 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) S.X. H.G.
0.47 67.9 Ta.2777.2.S1_a_at BJ318404 small Ran-related GTP-binding protein - 2e-118 At5g55190 RAN3 (RAN GTPASE 3) S.X. H.G.
0.46 66.8 Ta.27713.2.A1_x_at CD910422 Elongation factor-1 alpha - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
0.44 64.5 Ta.2739.3.S1_x_at BJ298795 Ribosomal protein L19 - 5e-44 At3g16780 60S ribosomal protein L19 (RPL19B) S.X. H.G.
0.36 51.9 Ta.22964.4.S1_at BJ218310 - - 2e-21 At3g06700 60S ribosomal protein L29 (RPL29A) S.X. H.G.
0.33 46.9 Ta.27789.1.S1_x_at CD920668 - - 9e-35 At1g09640 elongation factor 1B-gamma, putative / eEF-1B gamma, putative S.X. H.G.
0.31 42.7 Ta.24981.2.S1_a_at BQ579730 40S ribosomal protein S9 - 1e-23 At5g39850 40S ribosomal protein S9 (RPS9C) S.X. H.G.
0.28 39.2 Ta.18.1.S1_at BJ241578 - - 2e-113 At1g54270 EIF4A-2 S.X. H.G.
0.28 39.2 Ta.27713.1.A1_x_at CD879558 elongation factor-1 alpha - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
0.28 39.2 Ta.794.1.S1_x_at CK171366 QM - 1e-57 At1g14320 SAC52 (SUPPRESSOR OF ACAULIS 52) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.5 GSM314285 tissue type: 22 DAP embryo - rep2 GSE12508 Transcription patterns during wheat development
2.9 94.0 GSM314284 tissue type: 22 DAP embryo - rep1 GSE12508 Transcription patterns during wheat development
2.6 92.9 GSM314286 tissue type: 22 DAP embryo - rep3 GSE12508 Transcription patterns during wheat development
2.6 92.9 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3 91.5 GSM298088 Crown tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
2.2 91.0 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
2.2 91.0 GSM298085 Crown tissue of Solstice at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
2.2 91.0 GSM298059 Crown tissue of Harnesk at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
2.1 90.3 GSM111206 genotype A88 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.1 90.3 GSM314264 tissue type: seedling, crown - rep2 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 1e-113 410 Ta.15606.1.S1_at CD491155 - - 4e-10 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.24 1e-64 248 TaAffx.79142.1.S1_x_at CA720826 - - 2e-1 At3g25597 unknown protein C.G. S.X.
0.24 1e-64 248 TaAffx.79142.1.S1_at CA720826 - - 2e-1 At3g25597 unknown protein C.G. S.X.
0.15 2e-29 131 TaAffx.58743.1.S1_at CA617929 - - 7e-2 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.11 6e-20 99 Ta.8554.1.S1_at BQ162050 Lgul protein - 1e-11 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.10 4e-15 83 Ta.28068.1.S1_at CD862522 Lgul protein - 2e-10 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.10 4e-15 83 Ta.23813.1.S1_at CK157489 - - 2e-37 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.02 3e+0 34 TaAffx.29588.1.S1_at CA639405 - - 2e-2 At3g63120 CYCP1 C.G. S.X.
0.02 3e+0 34 Ta.14647.1.A1_at CK169127 - - 3e-1 At5g49015 Expressed protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 5e-14 79 Arabidopsis thaliana At1g11840 837731 ATGLX1 (GLYOXALASE I HOMOLOG) Encodes a glyoxalase I homolog ATGLX1. - - - C.G. S.X.
0.16 7e-11 69 Glycine max Gma.4424.1.S1_at BG237912 - - 2e-40 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.77 0 1524 Hordeum vulgare Contig1934_at Contig1934 - - 7e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.56 0 741 Oryza sativa Os08g0191700 AK066092.1 - Glyoxalase I family protein 2e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.22 4e-40 167 Populus trichocarpa Ptp.2633.1.S1_at CK095904 hypothetical protein - 2e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.22 2e-26 119 Vitis vinifera 1609781_s_at CB341681 hypothetical protein LOC100257313 - 1e-66 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.46 1e-127 456 Zea mays Zm.5962.1.S1_a_at AY241545.1 glyoxalase I - 1e-17 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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