Gene omics information

Query gene ID	Ta.1839.2.S1_at
Gene name	Fasciclin-like protein FLA26
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.8	Ta.1839.2.S1_at	CA615885	Fasciclin-like protein FLA26	-	2e-2	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	S.X.	H.G.	Please select
0.60	81.0	TaAffx.83004.1.S1_at	CA663511	-	-	4e+0	At4g11290	peroxidase, putative	S.X.	H.G.	Please select
0.58	79.2	Ta.4216.3.A1_at	CA615258	-	-	1e+0	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	S.X.	H.G.	Please select
0.52	73.7	Ta.14063.3.A1_at	CA614785	-	-	4e+0	At5g37840	-	S.X.	H.G.	Please select
0.48	69.0	TaAffx.84452.1.S1_at	CA636477	-	-	1e+1	At5g38090	unknown protein	S.X.	H.G.	Please select
0.47	67.9	TaAffx.80712.1.S1_at	CA693629	-	-	2e+1	At5g11360	-	S.X.	H.G.	Please select
0.39	56.1	TaAffx.106789.1.S1_at	CA711510	-	-	4e-9	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	S.X.	H.G.	Please select
0.38	54.7	Ta.14337.2.S1_at	CA738035	-	-	5e-2	At4g15930	microtubule motor	S.X.	H.G.	Please select
0.33	46.9	Ta.3065.2.A1_at	CA742800	-	-	3e-4	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	S.X.	H.G.	Please select
0.31	42.7	Ta.6866.3.A1_at	CA619945	-	-	1e+0	At5g57440	GS1	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
40.1	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
17.6	99.7	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.1	99.3	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.8	99.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.4	99.1	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.4	99.1	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3	97.6	GSM111220	genotype H23 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.8	97.2	GSM138145	Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
4.7	97.1	GSM111175	genotype G30 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.6	97.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	4e-25	113	Ta.1839.1.S1_x_at	CA603626	fasciclin-like protein FLA26	-	2e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.14	4e-25	113	Ta.1839.1.S1_at	CA603626	fasciclin-like protein FLA26	-	2e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.07	1e-3	42	TaAffx.81753.1.S1_at	CA682282	-	-	8e-1	At4g10695	unknown protein	C.G.	S.X.	Please select
0.04	2e-2	38	Ta.25997.1.A1_at	CD454482	-	-	5e-1	At3g01270	pectate lyase family protein	C.G.	S.X.	Please select
0.04	2e-2	38	Ta.10828.1.S1_at	BQ166649	-	-	1e-4	At5g14440	-	C.G.	S.X.	Please select
0.08	8e-2	36	TaAffx.58712.1.S1_at	CA617012	-	-	1e-4	At3g57150	NAP57 (Arabidopsis thaliana homologue of NAP57)	C.G.	S.X.	Please select
0.05	8e-2	36	TaAffx.36721.1.S1_at	BJ317652	-	-	2e-2	At1g15260	unknown protein	C.G.	S.X.	Please select
0.05	8e-2	36	TaAffx.118927.1.S1_at	BJ302126	-	-	1e+0	At5g58412	-	C.G.	S.X.	Please select
0.03	8e-2	36	Ta.4764.1.S1_s_at	BJ225880	-	-	7e-3	At5g11930	glutaredoxin family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-2	38	Arabidopsis thaliana	At1g20090	838598	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-3	42	Glycine max	GmaAffx.52021.1.S1_at	CA801441	-	-	3e+0	At5g47870	unknown protein	C.G.	S.X.	Please select
0.07	1e-20	97	Hordeum vulgare	Contig5827_at	Contig5827	-	-	7e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.06	2e-1	36	Oryza sativa	OsAffx.23713.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	1e-1	36	Populus trichocarpa	PtpAffx.41501.2.S1_at	BU885311	hypothetical protein	-	6e-1	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	9e-2	34	Vitis vinifera	1622197_at	CF403402	hypothetical protein LOC100265428	-	2e-1	At5g14600	tRNA (adenine-N1-)-methyltransferase	C.G.	S.X.	Please select
0.06	3e-2	36	Zea mays	ZmAffx.440.1.A1_at	AI676978	-	-	2e-4	At1g54410	dehydrin family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage