Gene omics information

Query gene ID	Ta.18268.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.18268.1.S1_at	CK211362	-	-	7e+0	At4g30370	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.99282.1.A1_at	CK208158	-	-	5e+0	At3g15250	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.9605.1.A1_at	BJ230145	-	-	4e-1	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.67	86.3	Ta.6001.2.S1_at	CA622286	-	-	9e-3	At3g05070	-	S.X.	H.G.	Please select
0.61	82.0	Ta.19821.1.S1_at	CA659800	-	-	1e+1	At5g02750	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.59	79.8	TaAffx.111174.1.S1_at	CA646654	-	-	1e+0	At1g11570	nuclear transport factor 2 (NTF2), putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
39.4	99.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
26.8	99.8	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
25.0	99.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
24.4	99.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
24.1	99.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
23.1	99.8	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
22.1	99.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
19.7	99.7	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
19.7	99.7	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
19.6	99.7	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	1e-109	397	Ta.11888.1.S1_at	CA597261	-	-	4e+1	At5g22210	unknown protein	C.G.	S.X.	Please select
0.36	3e-104	379	Ta.11888.2.S1_at	BQ170995	-	-	4e+0	At2g17556	unknown protein	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.37354.1.S1_at	BJ283779	-	-	5e+0	At5g61820	-	C.G.	S.X.	Please select
0.05	2e-6	54	TaAffx.29441.1.S1_at	CA642794	-	-	4e-1	At5g14790	binding	C.G.	S.X.	Please select
0.04	2e-6	54	Ta.16552.1.A1_at	BE516431	-	-	4e+0	At2g29440	ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)	C.G.	S.X.	Please select
0.03	3e-5	50	TaAffx.25612.1.S1_at	CA697772	-	-	4e+0	At3g32920	ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding	C.G.	S.X.	Please select
0.04	3e-5	50	Ta.6913.1.S1_at	AJ612389	-	-	1e-1	At1g14560	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.03	3e-5	50	Ta.29842.1.A1_at	BQ169843	-	-	1e+0	At3g62130	epimerase-related	C.G.	S.X.	Please select
0.03	3e-5	50	Ta.12784.1.A1_at	BJ282606	-	-	5e-1	At5g46295	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e+0	32	Arabidopsis thaliana	At4g30370	829160	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	7e-7	56	Glycine max	GmaAffx.93030.1.S1_s_at	CF808755	-	-	9e-2	At5g18210	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.19	2e-44	178	Hordeum vulgare	Contig19082_at	Contig19082	-	-	6e-1	At5g51090	unknown protein	C.G.	S.X.	Please select
0.29	3e-87	323	Oryza sativa	Os03g0748100	AK108283.1	-	Short-chain type dehydrogenase/reductase (EC1.-.-.-)	2e+0	At3g57500	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	7e-4	46	Populus trichocarpa	Ptp.7160.1.S1_s_at	CV243014	hypothetical protein	-	8e-3	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	1e-1	36	Vitis vinifera	1616923_s_at	CB919379	-	-	3e-1	At3g55790	unknown protein	C.G.	S.X.	Please select
0.11	9e-13	73	Zea mays	Zm.9135.2.A1_at	BM347885	versicolorin reductase	-	4e-1	At5g59990	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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