Gene omics information

Query gene ID	Ta.17884.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	98.9	Ta.17884.1.S1_at	CA625288	-	-	4e-6	At4g29735	unknown protein	S.X.	H.G.	Please select
0.42	60.9	Ta.1472.1.A1_at	BE430276	-	-	9e-1	At1g66540	cytochrome P450, putative	S.X.	H.G.	Please select
0.40	58.4	TaAffx.34241.2.S1_at	CA722326	-	-	4e+0	At5g51960	-	S.X.	H.G.	Please select
0.40	58.4	TaAffx.4913.1.S1_at	CA728728	-	-	2e+1	At5g67060	HEC1 (HECATE 1)	S.X.	H.G.	Please select
0.38	54.7	TaAffx.58533.1.S1_at	CA618813	-	-	1e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	S.X.	H.G.	Please select
0.36	51.9	TaAffx.34241.2.S1_x_at	CA722326	-	-	4e+0	At5g51960	-	S.X.	H.G.	Please select
0.35	49.8	TaAffx.105769.1.S1_at	CA730148	-	-	3e-1	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	S.X.	H.G.	Please select
0.30	40.9	TaAffx.8469.1.S1_at	CA624919	-	-	1e+1	At4g13140	-	S.X.	H.G.	Please select
0.18	21.0	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.7	99.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
10.4	99.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.7	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.1	98.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.7	98.7	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.2	98.5	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.8	97.9	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM138191	genotype D39 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	6e-39	161	Ta.3405.3.S1_at	CA604375	-	-	2e+0	At4g29735	unknown protein	C.G.	S.X.	Please select
0.25	6e-39	161	Ta.3405.3.S1_x_at	CA604375	-	-	2e+0	At4g29735	unknown protein	C.G.	S.X.	Please select
0.29	4e-37	155	Ta.3405.2.S1_at	BQ744276	-	-	3e-1	At4g29735	unknown protein	C.G.	S.X.	Please select
0.26	2e-36	153	Ta.3405.1.S1_x_at	CD886272	-	-	2e+0	At4g29735	unknown protein	C.G.	S.X.	Please select
0.26	2e-36	153	Ta.3405.1.S1_at	CD886272	-	-	2e+0	At4g29735	unknown protein	C.G.	S.X.	Please select
0.25	4e-34	145	TaAffx.52339.1.S1_at	CA709007	-	-	1e+0	At1g54730	sugar transporter, putative	C.G.	S.X.	Please select
0.28	3e-22	105	Ta.12989.1.S1_at	CA709284	-	-	4e-1	At4g29735	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.4850.1.A1_x_at	BG905091	-	-	2e-2	At1g53620	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.4850.1.A1_s_at	BG905091	-	-	2e-2	At1g53620	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	4e-6	52	Arabidopsis thaliana	At4g29735	829095	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.15	2e-5	50	Glycine max	GmaAffx.90005.1.S1_at	CF805730	-	-	1e-6	At4g29735	unknown protein	C.G.	S.X.	Please select
0.36	3e-45	180	Hordeum vulgare	Contig6349_at	Contig6349	-	-	2e-5	At4g29735	unknown protein	C.G.	S.X.	Please select
0.34	7e-62	238	Oryza sativa	Os06g0567000	AK121337.1	-	Protein of unknown function UPF0197 family protein	1e-3	At4g29735	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	3e-1	36	Populus trichocarpa	Ptp.735.1.S1_at	CK088464	hypothetical protein	-	6e-6	At4g29735	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1614420_at	CB345224	-	-	4e-80	Atcg00020	-	C.G.	S.X.	Please select
0.81	0	904	Zea mays	Zm.3399.1.A1_at	CF011003	-	-	6e-6	At4g29735	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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