Gene omics information

Query gene ID	Ta.17416.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.17416.1.S1_at	CA620668	-	-	4e+0	At5g13200	GRAM domain-containing protein / ABA-responsive protein-related	S.X.	H.G.	Please select
0.04	5.8	TaAffx.56827.1.S1_x_at	CA643254	-	-	1e+1	At5g54590	protein kinase family protein	S.X.	H.G.	Please select
0.02	3.6	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	S.X.	H.G.	Please select
0.02	3.6	Ta.22939.2.S1_x_at	CA628925	-	-	9e-1	At5g43970	TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V)	S.X.	H.G.	Please select
0.00	0.7	Ta.1342.1.S1_s_at	CD933741	-	-	6e-9	At2g23090	unknown protein	S.X.	H.G.	Please select
0.00	0.7	Ta.1058.2.S1_at	BJ254771	S-adenosylmethionine decarboxylase precursor	-	3e-5	At3g02470	SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.6	99.7	GSM111180	genotype C31 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
19.7	99.7	GSM246395	SB69_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
18.4	99.7	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.8	99.7	GSM138196	genotype F82 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
17.3	99.6	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.0	99.5	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.0	99.4	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
12.8	99.4	GSM250890	Tc_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.4	99.3	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
10.9	99.3	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	1e-46	186	Ta.28587.1.S1_x_at	CA645579	-	-	4e-2	At4g01600	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please select
0.10	1e-6	54	Ta.27945.1.S1_x_at	CK216098	-	-	3e-3	At5g23360	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please select
0.05	4e-3	42	Ta.6521.2.S1_at	CA648110	-	-	1e+0	At4g26810	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please select
0.05	4e-3	42	Ta.6521.2.S1_a_at	CA648110	-	-	1e+0	At4g26810	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please select
0.04	7e-2	38	TaAffx.55648.1.S1_at	CA663157	-	-	3e-4	At3g06100	NIP7	C.G.	S.X.	Please select
0.04	7e-2	38	TaAffx.4857.1.S1_at	CA730111	-	-	4e+0	At1g77682	-	C.G.	S.X.	Please select
0.04	7e-2	38	Ta.17362.1.S1_at	CA620047	-	-	3e-1	At3g06750	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.07	3e-1	36	Ta.6521.1.S1_at	BJ271600	-	-	2e+0	At1g28200	FIP1 (FH INTERACTING PROTEIN 1)	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.10845.1.A1_at	BQ166681	-	-	5e-1	At4g38010	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At5g13200	831159	GRAM domain-containing protein / ABA-responsive protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e+0	32	Glycine max	PsAffx.CL2361Contig1_s_at	PsAffx.CL2361Contig1	-	-	4e+0	At3g53740	60S ribosomal protein L36 (RPL36B)	C.G.	S.X.	Please select
0.24	2e-49	194	Hordeum vulgare	Contig20012_at	Contig20012	-	-	2e-3	At4g01600	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please select
0.21	5e-44	178	Oryza sativa	Os03g0736700	AK073026.1	-	GRAM domain containing protein	6e-1	At4g01600	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	PtpAffx.224314.1.S1_at	pmrna42754	hypothetical protein	-	4e-4	At5g13200	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e+0	30	Vitis vinifera	1610055_at	CB346192	-	-	1e-3	At5g50740	metal ion binding	C.G.	S.X.	Please select
0.53	2e-160	563	Zea mays	Zm.8843.1.A1_at	BM266672	FIP1	-	1e+0	At4g40100	ABA-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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