CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.17400.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.17400.1.S1_at CA620487 - - 6e-1 At5g47455 unknown protein S.X. H.G.
0.43 62.2 TaAffx.67799.1.S1_at BE516875 - - 2e+1 At5g55460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.42 60.9 Ta.20440.1.S1_at BQ238761 - - 2e-2 At1g15290 binding S.X. H.G.
0.40 58.4 TaAffx.82994.1.S1_at CA653750 - - 8e-5 At5g04710 aspartyl aminopeptidase, putative S.X. H.G.
0.36 51.9 Ta.6901.1.S1_at CK154963 - - 4e-8 At2g47590 PHR2 (photolyase/blue-light receptor 2) S.X. H.G.
0.35 49.8 Ta.1572.1.S1_a_at CB307287 - - 3e-18 At5g66120 3-dehydroquinate synthase, putative S.X. H.G.
0.34 48.1 Ta.1964.1.S1_a_at CD890475 - - 2e+0 At3g13500 unknown protein S.X. H.G.
0.34 48.1 TaAffx.129292.1.S1_at CD935490 - - 8e+0 At3g03272 - S.X. H.G.
0.33 46.9 TaAffx.111902.1.S1_at CA630792 - - 2e-2 At5g38060 unknown protein S.X. H.G.
0.30 40.9 Ta.3166.1.S1_at CA609253 - - 2e-2 At1g66430 pfkB-type carbohydrate kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.3 99.0 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3 98.6 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5 97.8 GSM324494 Si+ B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.4 97.7 GSM343682 Wheat var. Kennedy_control_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.3 97.6 GSM315203 target strand labeled: Antisense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
4.8 97.2 GSM138207 genotype B11 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3 96.7 GSM111248 genotype F87 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9 96.1 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1 94.5 GSM343687 Wheat var. Kennedy_Fp inoculated_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1 94.5 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 5e-11 67 Ta.10911.1.S1_at BQ166810 - - 7e+0 At3g48040 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) C.G. S.X.
0.03 2e-1 36 TaAffx.51190.1.S1_at BJ259821 - - 1e+0 At1g05615 unknown protein C.G. S.X.
0.05 6e-1 34 TaAffx.43241.1.S1_at BQ802744 - - 2e-1 At2g03800 GEK1 (GEKO1) C.G. S.X.
0.04 6e-1 34 Ta.25143.1.S1_s_at CA617074 - - 4e-9 At1g27330 - C.G. S.X.
0.04 6e-1 34 Ta.17055.1.S1_x_at CA619177 - - 2e-11 At1g27330 - C.G. S.X.
0.04 3e+0 32 TaAffx.9504.1.S1_at CA596666 - - 2e+1 At5g56600 PRF3 (PROFILIN 3) C.G. S.X.
0.04 3e+0 32 TaAffx.84416.1.S1_at CA637296 - - 4e+0 At4g32470 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative C.G. S.X.
0.04 3e+0 32 TaAffx.5802.3.S1_at CA616764 - - 1e+0 At4g26170 unknown protein C.G. S.X.
0.04 3e+0 32 TaAffx.50923.1.S1_at CA733414 - - 3e-1 At5g03030 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-1 34 Arabidopsis thaliana At5g47455 834795 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.04 2e-1 36 Glycine max GmaAffx.19777.1.A1_at BU547040 - - 1e+0 At2g34450 high mobility group (HMG1/2) family protein C.G. S.X.
0.06 5e+0 30 Hordeum vulgare AF032681_at AF032681 - - 6e-1 At1g75717 unknown protein C.G. S.X.
0.06 5e+0 32 Oryza sativa OsAffx.796.1.S1_at - - - 0 C.G. S.X.
0.04 3e+0 32 Populus trichocarpa PtpAffx.218653.1.S1_at pmrna34348 hypothetical protein - 4e+0 At3g60830 ATARP7 (ACTIN-RELATED PROTEIN 7) C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1620689_at CF202169.1 - - 1e+1 At4g24975 self-incompatibility protein-related C.G. S.X.
0.03 4e+0 30 Zea mays Zm.9803.1.A1_at BM339320 - - 1e+0 At1g64740 TUA1 (ALPHA-1 TUBULIN) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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