Gene omics information

Query gene ID	Ta.17390.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.17390.1.S1_at	CA620383	-	-	1e+0	At2g06908	unknown protein	S.X.	H.G.	Please select
0.33	46.9	TaAffx.135182.1.S1_at	CA673772	-	-	2e+1	At5g23640	unknown protein	S.X.	H.G.	Please select
0.12	13.3	TaAffx.58105.1.S1_at	CA622402	-	-	1e+1	At5g57510	unknown protein	S.X.	H.G.	Please select
0.07	8.6	TaAffx.112556.1.S1_at	CA622998	-	-	4e+0	At1g67760	ATP binding / protein binding / unfolded protein binding	S.X.	H.G.	Please select
0.05	6.7	TaAffx.53264.1.S1_at	CA694461	-	-	2e-1	At3g49300	proline-rich family protein	S.X.	H.G.	Please select
0.01	2.4	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.0	99.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
16.3	99.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
15.5	99.6	GSM298054	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
12.8	99.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.0	99.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.1	99.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM143524	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.2	98.8	GSM143511	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.7	98.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	3e-7	56	Ta.26716.1.A1_at	CD491281	-	-	2e+0	At2g30810	gibberellin-regulated family protein	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.64167.1.S1_at	BJ318428	-	-	2e+0	At3g16240	DELTA-TIP	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.3245.1.S1_at	CD916575	-	-	2e-12	At4g39690	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.1341.1.S1_at	BE425554	-	-	4e+0	At1g33820	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.9459.1.S1_at	CA598229	-	-	4e+0	At5g03770	3-deoxy-D-manno-octulosonic acid transferase-related	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.26493.1.S1_at	CA688336	-	-	3e-1	At3g11730	ATFP8	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.3368.2.A1_at	CA652852	-	-	4e-3	At5g51120	PABN1 (POLYADENYLATE-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.79077.1.S1_at	CA722981	-	-	2e-1	At3g22070	proline-rich family protein	C.G.	S.X.	Please select
0.02	2e+1	30	TaAffx.78570.1.S1_at	CA692312	-	-	3e-5	At1g58060	helicase domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At2g06908	815257	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.36831.1.A1_at	BI968465	DIM protein	-	6e-1	At5g19790	RAP2.11 (related to AP2 11)	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	HF13N11r_x_at	HF13N11r	-	-	2e+0	At5g10260	AtRABH1e (Arabidopsis Rab GTPase homolog H1e)	C.G.	S.X.	Please select
0.05	2e-6	54	Oryza sativa	Os04g0636600	AK111077.1	-	Conserved hypothetical protein	1e+0	At1g19870	iqd32 (IQ-domain 32)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.56823.1.S1_at	CV251016	hypothetical protein	-	8e-59	At5g35460	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1618550_at	CD715311	-	-	9e-2	At5g17270	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.46	3e-107	387	Zea mays	Zm.16433.1.A1_at	CF348894	-	-	7e-2	At1g27860	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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