CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.17270.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.17270.1.S1_at CA619221 - - 1e+0 At2g45420 LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18) S.X. H.G.
0.05 6.7 TaAffx.8637.1.S1_at CA622296 - - 1e+1 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
0.05 6.7 Ta.3478.3.S1_x_at CA637826 - - 2e-11 At1g69670 CUL3B (CULLIN 3B) S.X. H.G.
0.03 4.7 TaAffx.105846.1.S1_at CA729040 - - 1e+0 At3g43630 nodulin, putative S.X. H.G.
0.03 4.7 TaAffx.78717.1.S1_at CA728365 - - 3e+0 At2g24570 WRKY17 S.X. H.G.
0.00 0.7 Ta.27101.10.S1_x_at AJ613323 - - 1e-26 At5g10980 histone H3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.4 99.2 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
8.9 99.0 GSM250908 Tc_7dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7 98.9 GSM138216 genotype H9 developing seed at 5 days after anthesis, biological rep2 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.5 98.9 GSM298079 Leaf tissue of Solstice at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.1 98.5 GSM138210 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.0 98.5 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.9 98.4 GSM298087 Crown tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
6.7 98.4 GSM138209 genotype H23 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.4 98.2 GSM250893 TcLr34_3dpi_mock_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2 98.1 GSM139931 Anther maturea nthers rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 8e-11 67 TaAffx.113540.1.S1_at CA609979 - - 1e+1 At4g10695 unknown protein C.G. S.X.
0.03 3e-1 36 Ta.25581.1.S1_at BE430349 - - 1e-7 At5g63860 UVR8 (UVB-RESISTANCE 8) C.G. S.X.
0.03 1e+0 34 TaAffx.59680.1.S1_at CA733434 - - 1e+0 At5g48920 TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7) C.G. S.X.
0.04 1e+0 34 TaAffx.30642.1.S1_at CA623307 - - 4e-3 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.03 1e+0 34 Ta.22186.1.S1_at CA729084 - - 3e-1 At3g55920 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative C.G. S.X.
0.03 4e+0 32 TaAffx.99267.1.S1_at CA679793 - - 3e-1 At5g15600 SP1L4 (SPIRAL1-LIKE4) C.G. S.X.
0.03 4e+0 32 TaAffx.5875.1.S1_at CA696752 - - 1e+0 At4g28720 flavin-containing monooxygenase family protein / FMO family protein C.G. S.X.
0.03 4e+0 32 TaAffx.23939.1.S1_x_at CA727954 Wpk4 protein kinase - 5e-9 At2g38490 CIPK22 (CBL-INTERACTING PROTEIN KINASE 22) C.G. S.X.
0.03 4e+0 32 TaAffx.113070.1.S1_at CA618377 - - 3e+0 At2g20613 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At2g45420 819150 LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18) F:unknown;P:xylem histogenesis;C:nucleus;MPBOFVA - - - C.G. S.X.
0.05 2e-2 40 Glycine max Gma.5710.1.S1_at AI442566 - - 7e-5 At4g08230 glycine-rich protein C.G. S.X.
0.33 1e-35 149 Hordeum vulgare Contig4804_at Contig4804 - - 1e-1 At1g72600 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.30 9e-40 165 Oryza sativa Os03g0263700 AK071748.1 - Conserved hypothetical protein 5e+0 At5g06020 self-incompatibility protein-related C.G. S.X.
0.17 1e-7 57 Populus trichocarpa PtpAffx.12741.1.A1_at CV234093 - - 8e-2 At4g08230 glycine-rich protein C.G. S.X.
0.09 8e-5 46 Vitis vinifera 1622126_at CF568916 - - 7e-8 At4g08230 glycine-rich protein C.G. S.X.
0.64 5e-118 422 Zea mays Zm.7704.1.A1_at BM079575 hypothetical protein LOC100278612 - 5e-3 At1g62240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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