Gene omics information

Query gene ID	Ta.1717.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	93.4	Ta.1717.1.S1_at	CD452698	-	-	1e-2	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	S.X.	H.G.	Please select
0.80	92.2	Ta.1717.1.S1_x_at	CD452698	-	-	1e-2	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	S.X.	H.G.	Please select
0.44	64.5	Ta.14073.1.S1_at	BJ228415	-	-	5e-36	At1g09430	ACLA-3	S.X.	H.G.	Please select
0.29	39.2	Ta.14073.1.S1_x_at	BJ228415	-	-	5e-36	At1g09430	ACLA-3	S.X.	H.G.	Please select
0.27	35.6	Ta.25867.1.S1_s_at	CD453732	-	-	2e+0	At4g02195	SYP42 (SYNTAXIN OF PLANTS 42)	S.X.	H.G.	Please select
0.25	32.1	Ta.7443.1.S1_at	CK153462	Protein serine/threonine kinase-like	-	9e-26	At5g13160	PBS1 (avrPphB susceptible 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.4	99.6	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
15.3	99.6	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.9	99.5	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.8	99.5	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.8	99.4	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.2	99.2	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.5	98.9	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	0	2056	Ta.1717.1.S1_x_at	CD452698	-	-	1e-2	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	C.G.	S.X.	Please select
0.23	2e-100	367	Ta.21677.1.S1_at	CA698161	-	-	4e+0	At5g65660	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.23	2e-100	367	Ta.21677.1.S1_x_at	CA698161	-	-	4e+0	At5g65660	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.16	7e-35	149	TaAffx.86556.1.S1_at	CA605836	-	-	2e+0	At1g11760	unknown protein	C.G.	S.X.	Please select
0.06	6e-17	89	TaAffx.92089.1.S1_at	BJ281142	-	-	1e-6	At1g72710	CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)	C.G.	S.X.	Please select
0.06	2e-10	67	Ta.21022.2.S1_x_at	CA680598	-	-	6e+0	At5g63070	40S ribosomal protein S15, putative	C.G.	S.X.	Please select
0.04	8e-10	65	TaAffx.27392.1.S1_at	CA677365	-	-	4e+0	At4g33880	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.05	8e-7	56	TaAffx.84332.1.S1_at	CA639385	-	-	4e+0	At1g79170	unknown protein	C.G.	S.X.	Please select
0.04	8e-7	56	Ta.12673.1.S1_at	CA638726	-	-	5e+0	At5g43620	S-locus protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e-2	42	Arabidopsis thaliana	At1g55320	841977	AAE18 (ACYL-ACTIVATING ENZYME 18)	Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-4	48	Glycine max	GmaAffx.36650.1.S1_at	BE822020	-	-	1e-5	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	C.G.	S.X.	Please select
0.78	0	1402	Hordeum vulgare	Contig15036_at	Contig15036	-	-	1e-1	At3g07090	unknown protein	C.G.	S.X.	Please select
0.42	2e-175	617	Oryza sativa	Os03g0805500	AK067857.1	-	AMP-dependent synthetase and ligase domaincontaining protein	4e-7	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	7e-8	59	Populus trichocarpa	PtpAffx.200035.1.S1_at	pmrna63	hypothetical protein	-	2e-17	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e-1	34	Vitis vinifera	1615655_at	CB346154	-	-	1e+0	At5g39610	ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6)	C.G.	S.X.	Please select
0.50	2e-110	398	Zea mays	Zm.5501.1.A1_at	BM337994	hypothetical protein LOC100194266	-	4e-2	At1g55320	AAE18 (ACYL-ACTIVATING ENZYME 18)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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