CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.16760.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 67.9 Ta.16760.1.S1_at CA611994 - - 6e-48 At5g52920 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) S.X. H.G.
0.55 76.8 Ta.750.1.S1_at BE517793 - - 2e-69 At5g46290 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I) S.X. H.G.
0.55 76.8 Ta.1277.1.A1_at CK196131 - - 1e-30 At1g34430 EMB3003 (embryo defective 3003) S.X. H.G.
0.50 72.4 Ta.9704.1.S1_at CK194340 enoyl-Acp reductase - 1e-27 At2g05990 MOD1 (MOSAIC DEATH 1) S.X. H.G.
0.30 40.9 Ta.3072.1.S1_at CK214648 - - 2e-16 At3g25860 LTA2 S.X. H.G.
0.17 19.8 Ta.9247.1.S1_at BJ216020 - - 2e-13 At3g48040 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.3 99.7 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.0 99.1 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.0 99.1 GSM139916 Anther leptotene-pachytene rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.6 99.1 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.0 99.0 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.9 99.0 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.7 98.9 GSM139924 Anther telophaseI-telophaseII rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6 98.9 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.2 98.8 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.2 98.8 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-4 48 Ta.4023.1.S1_at CK193538 - - 2e-14 At1g32440 PKp3 (plastidial pyruvate kinase 3) C.G. S.X.
0.01 9e-1 36 TaAffx.128554.1.S1_s_at CD891797 - - 1e-18 At4g35800 NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) C.G. S.X.
0.01 9e-1 36 Ta.3967.1.S1_at BJ284214 - - 3e+0 At5g02750 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 4e+0 34 TaAffx.58095.1.S1_at CA622460 - - 2e+0 At1g08970 NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9) C.G. S.X.
0.01 4e+0 34 TaAffx.54006.1.S1_at CA686855 - - 1e+0 At4g21050 Dof-type zinc finger domain-containing protein C.G. S.X.
0.01 4e+0 34 Ta.7629.1.A1_at BU100947 - - 1e+0 At1g63840 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 4e+0 34 Ta.12069.1.S1_at AJ603360 - - 2e+0 At5g50820 anac097 (Arabidopsis NAC domain containing protein 97) C.G. S.X.
0.01 1e+1 32 TaAffx.70679.1.A1_at BQ801817 - - 1e+0 At3g44750 HDA3 (HISTONE DEACETYLASE 3) C.G. S.X.
0.01 1e+1 32 TaAffx.36446.1.S1_at BJ270754 - - 7e-26 At2g26300 GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 6e-48 192 Arabidopsis thaliana At5g52920 835369 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content. - - - C.G. S.X.
0.33 8e-36 153 Glycine max Gma.1504.1.S1_at BQ298286 - - 6e-100 At5g52920 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) C.G. S.X.
0.48 0 636 Hordeum vulgare Contig16137_at Contig16137 - - 1e+0 At1g32440 PKp3 (plastidial pyruvate kinase 3) C.G. S.X.
0.59 0 1295 Oryza sativa Os.41467.1.S1_at - - - 0 C.G. S.X.
0.44 6e-49 196 Populus trichocarpa PtpAffx.2725.1.A1_at CV239343 hypothetical protein - 4e-175 At5g52920 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) C.G. S.X.
0.16 1e-18 93 Vitis vinifera 1617838_at CB008961 - - 2e-80 At1g32440 PKp3 (plastidial pyruvate kinase 3) C.G. S.X.
0.54 2e-163 575 Zea mays Zm.5190.1.A1_at CF006531 Pyruvate kinase-like - 9e-44 At5g52920 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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