CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.16401.1.A1_s_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 83.1 Ta.16401.1.A1_s_at BJ215044 - - 2e-7 At4g02120 CTP synthase, putative / UTP--ammonia ligase, putative S.X. H.G.
0.71 88.0 Ta.7590.2.S1_a_at CK215141 - - 9e-8 At5g27490 integral membrane Yip1 family protein S.X. H.G.
0.47 67.9 Ta.9793.1.A1_at BJ252593 - - 9e-4 At5g24260 prolyl oligopeptidase family protein S.X. H.G.
0.28 39.2 Ta.6850.1.S1_at BJ311627 - - 8e-19 At5g52210 ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) S.X. H.G.
0.25 32.1 Ta.10490.1.S1_at BJ270520 - - 1e-5 At1g28120 - S.X. H.G.
0.22 27.1 Ta.4226.1.A1_at CD875106 - - 3e+0 At1g22900 - S.X. H.G.
0.19 22.4 Ta.9136.1.S1_at CK200225 - - 3e-1 At1g76420 CUC3 (CUP SHAPED COTYLEDON3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.8 98.4 GSM139924 Anther telophaseI-telophaseII rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.8 98.4 GSM139917 Anther leptotene-pachytene rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0 98.0 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8 97.9 GSM139916 Anther leptotene-pachytene rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8 97.9 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6 97.8 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4 97.7 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4 97.7 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3 97.6 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1 97.5 GSM139921 Anther diplotene-anaphaseI rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 2672 Ta.16401.1.A1_at BJ215044 - - 2e-7 At4g02120 CTP synthase, putative / UTP--ammonia ligase, putative C.G. S.X.
0.04 6e-8 59 Ta.6898.1.S1_at CA665240 - - 1e-56 At3g12670 emb2742 (embryo defective 2742) C.G. S.X.
0.02 9e-1 36 TaAffx.107342.1.S1_at CA701590 - - 1e+0 At2g27720 60S acidic ribosomal protein P2 (RPP2A) C.G. S.X.
0.01 9e-1 36 Ta.8320.1.S1_a_at CK207555 - - 2e-82 At1g10950 endomembrane protein 70, putative C.G. S.X.
0.01 9e-1 36 Ta.8320.1.S1_x_at CK207555 - - 2e-82 At1g10950 endomembrane protein 70, putative C.G. S.X.
0.01 9e-1 36 Ta.8320.1.S1_at CK207555 - - 2e-82 At1g10950 endomembrane protein 70, putative C.G. S.X.
0.01 9e-1 36 Ta.10045.1.S1_a_at CA604324 - - 1e-52 At1g10950 endomembrane protein 70, putative C.G. S.X.
0.01 3e+0 34 TaAffx.92095.1.S1_at BJ287616 - - 8e-5 At1g73380 unknown protein C.G. S.X.
0.02 3e+0 34 TaAffx.86211.1.S1_at CA614148 - - 4e+0 At1g15860 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-7 57 Arabidopsis thaliana At4g02120 828137 CTP synthase, putative / UTP--ammonia ligase, putative F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:endomembrane system;OBMFAP - - - C.G. S.X.
0.05 2e-2 42 Glycine max GmaAffx.71385.1.S1_at BM270515 - - 3e-2 At3g12670 emb2742 (embryo defective 2742) C.G. S.X.
0.48 0 856 Hordeum vulgare Contig17120_at Contig17120 - - 1e+0 At3g25655 IDL1 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 1) C.G. S.X.
0.53 0 973 Oryza sativa Os12g0556600 AK063965.1 - CTP synthase family protein 4e-25 At4g02120 CTP synthase, putative / UTP--ammonia ligase, putative C.G. S.X.
0.06 3e-4 48 Populus trichocarpa PtpAffx.207817.1.S1_at pmrna15533 hypothetical protein - 3e-108 At3g12670 emb2742 (embryo defective 2742) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1615363_at CF204706.1 - - 5e-1 At5g61590 AP2 domain-containing transcription factor family protein C.G. S.X.
0.47 0 724 Zea mays Zm.17927.1.S1_at CA403602 CTP synthase - 4e-28 At4g02120 CTP synthase, putative / UTP--ammonia ligase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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